Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07-
01] 1,352 sequences; 17,598,654 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq283 100 2e-16
seq1343 84.2 2e-11
>seq283
Length=1109
Score = 100 bits (110), Expect = 2e-16
Identities = 162/232 (70%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117
|||||||| | | | ||| || || || |||||||||||||| || || ||||| |||
Sbjct 329 CCTCCTCTCAGCCTGAGCACTAAGTGAAGAGTGCTCTCTTTTTGAATGTTGTAATCAGCA 270
Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177
|| || || | || |||||||| ||||| ||||| || | | ||||||||| | |||
Sbjct 269 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCCGGGGGA 210
Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATC---GCTCGACTCC 39234
| | ||| |||||| ||| || |||| | | | || || ||| |||
Sbjct 209 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTATCAATAGTGTCAGAGCT---CTCG 153
Query 39235 ACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286
|| || | ||||| | || || || || ||||| || |||||||||||||
Sbjct 152 ACCTCAAGGGTGATGGTCTTGCCAGTTAGAGTTTTCACGAAGATTTGCATCT 101
>seq1343
Length=2062
Score = 84.2 bits (92), Expect = 2e-11
Identities = 152/217 (70%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCG-GCAAGTGTTCGTTC 39128
|| ||||||||||| || || ||| || || || || || ||| |||| || || |
Sbjct 120 CGCAACACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGCTCAAG-GTACGGCC 178
Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188
||| |||||||| ||||| || || || |||||||| ||||| | || | | || ||
Sbjct 179 GTCCTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCTGGAGGAATTCCTTCCTT 238
Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247
|||| ||| || |||| ||| | | | || ||| | ||| || || | ||||
Sbjct 239 GTCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGCCTCGACCTCAAGAGTGA 297
Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| | || ||||| || || || ||||| ||||||||
Sbjct 298 TAGTCTTACCCGTGAGAGTCTTGACAAAAATTTGCAT 334
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429538522162376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |