Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07- 01] 1,352 sequences; 17,598,654 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq1343 123 2e-23 seq283 100 2e-16 >seq1343 Length=2062 Score = 123 bits (136), Expect = 2e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| ||||| ||||||||||| || ||||| ||||| || || || || || | Sbjct 1475 AATGCAGATCTTCGTGAAAACCCTCACTGGTAAAACCATCACCCTTGAGGTCGAAGCCTC 1416 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | || | | || ||| ||| ||||| || ||| | |||||||| || Sbjct 1415 GGACACCATCGAGAACGTCAAGTCAAAGATTCAGGACAAGGAGGGTATCCCGCCAGACCA 1356 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||||| | || || || || || ||| |||| || | |||||| | |||| ||||| Sbjct 1355 ACAGCGTCTTATTTTCGCTGGTAAGCAATTGGAGGATGGTCGCACTCTGAGCGACTACAA 1296 Query 23790 CATACAAAAAGAGTCCAC 23807 || || || |||||||| Sbjct 1295 TATCCAGAAGGAGTCCAC 1278 Score = 122 bits (134), Expect = 6e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || ||||| | || ||||| || ||||| |||||||| || || || Sbjct 562 ATGCAGATTTTTGTCAAAACTTTGACTGGAAAGACCATCACCCTCGAAGTGGAGGCCTCG 503 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || ||| ||| ||||| || ||| | || || || ||| Sbjct 502 GACACCATTGACAACGTCAAGTCAAAGATTCAAGACAAGGAGGGTATCCCACCCGACCAA 443 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || ||||| || ||||| || || | ||||| || |||| |||||| Sbjct 442 CAGCGTCTCATCTTCGCCGGAAAGCAACTCGAGGAGGGTCGCACCTTGAGCGACTACAAC 383 Query 23791 ATACAAAAAGAGTCCAC 23807 || |||||||| || || Sbjct 382 ATCCAAAAAGAATCAAC 366 Score = 116 bits (128), Expect = 3e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || ||||| || || || || |||||||| || || || || || Sbjct 1930 ATGCAAATCTTCGTCAAGACCCTAACTGGTAAGACCATCACTCTTGAGGTCGAGGCCTCG 1871 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || |||| | | ||||| || || | |||||||| || Sbjct 1870 GACACCATCGACAATGTCAAGTCAAAGA-TCCAGGACAAGGAGGGCATCCCGCCAGACCA 1812 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || ||||| ||||| ||| |||| |||| ||||| | |||||||||| Sbjct 1811 GCAGCGTCTCATTTTTGCTGGCAAGCAATTGGAGGACGGCCGCACCCTGAGCGATTACAA 1752 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| ||||| ||||| || | ||| | ||| Sbjct 1751 CATCCAAAAGGAGTCTACCCTGCATCTTGTT 1721 Score = 114 bits (126), Expect = 9e-21 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || ||||||||||| || || || ||||| ||||| || || || | Sbjct 1246 ATGCAGATTTTTGTGAAAACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGGCCTCA 1187 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||| ||| | || | || ||| ||||| || || | || ||||| || Sbjct 1186 GACACTATTGACAATGTGAAGTC-CAAGATTCAGGACAAGGAGGGAATTCCTCCAGACCA 1128 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||| | || ||||| || || ||| |||| |||| |||||| | | || ||||| Sbjct 1127 ACAACGTCTGATCTTTGCTGGTAAGCAATTGGAGGACGGTCGCACTCTCAGTGACTACAA 1068 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 || ||||| || || || |||| || || Sbjct 1067 TATTCAAAAGGAATCAACCCTACACTTGGT 1038 Score = 111 bits (122), Expect = 1e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||| | || || || || || ||||||||||| || | || Sbjct 790 ATGCAGATTTTCGTCAAGACCTTGACCGGTAAGACTATTACTCTCGAAGTGGAGGCTTCG 731 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | |||| | ||||| || || | || ||||| || Sbjct 730 GACACGATCGACAATGTCAAGTCGAAAA-TCCAGGACAAGGAGGGCATCCCCCCAGACCA 672 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||||||| || |||||||| || || || ||||| | |||||| | | || ||||| Sbjct 671 ACAGCGTTTGATCTTTGCCGGAAAGCAGCTCGAAGATGGTCGCACTCTCAGTGACTACAA 612 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 611 CATCCAGAAGGAGTCAAC 594 Score = 107 bits (118), Expect = 1e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || || || ||||| || ||||| ||||| || || || || || | Sbjct 1018 ATGCAAATCTTTGTCAAGACACTCACTGGTAAAACTATCACCCTAGAGGTCGAGGCCTCA 959 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | ||||| || || ||||| || || | || ||||| ||| Sbjct 958 GACACCATCGATAATGTAAAATCGAAGATCCAAGACAAGGAGGGAATTCCTCCAGACCAA 899 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || || ||||| || |||||||| |||| ||||| | ||||||||||| Sbjct 898 CAACGTCTGATCTTCGCCGGTAAGCAACTGGAGGACGGCCGCACCCTGAGCGATTACAAC 839 Query 23791 ATACAAAAAGAGTCCAC 23807 || ||||| |||||||| Sbjct 838 ATCCAAAAGGAGTCCAC 822 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || |||||||||||||| || ||||| ||||| || || || | Sbjct 1702 ATGCAGATCTTCGTCAAGACCCTCACGGGAAAGACCATCACCCTCGAGGTGGAGGCCTCA 1643 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || || ||||| || ||| | || || || ||| Sbjct 1642 GACACCATTGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCACCCGACCAA 1583 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || || || || ||||| || ||| | |||||| | | || |||||| Sbjct 1582 CAGCGTCTCATTTTCGCTGGTAAGCAACTCGAGGACAACCGCACTCTGAGTGACTACAAC 1523 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || || || || Sbjct 1522 ATTCAGAAGGAATCAAC 1506 >seq283 Length=1109 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| ||||| || || || || || ||||| || || || || | | Sbjct 103 ATGCAAATCTTCGTGAAAACTCTAACTGGCAAGACCATCACCCTTGAGGTCGAGAGCTCT 162 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||| ||| | || | || | | ||||| || ||| | || || || || Sbjct 163 GACACTATTGATAATGTCAAGGCCAAGA-TCCAGGACAAGGAGGGTATTCCCCCGGACCA 221 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||| ||||| || || || || | ||||| | | |||||||| Sbjct 222 GCAGAGGTTGATTTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTTGCTGATTACAA 281 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||| ||||||||| ||| | || ||||| | ||| || |||||||| Sbjct 282 CATTCAAAAAGAGAGCACTCTTCACTTAGTGCTCAGGCTGAGAGGAGGA 330 Score = 100 bits (110), Expect = 2e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||||||||| ||||| |||||||| ||||| || || || || || || || | | Sbjct 330 AATGCAGATTTTTGTTAAGACCCTCACTGGAAAGACTATTACCCTTGAGGTGGAAAGCTC 389 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| |||| ||| | || | || || ||||| |||||| | || ||||| | Sbjct 390 TGACACCATTGACAATGTCAAGTC-CAAGATCCAAGACAAGGAAGGTATTCCTCCAGACC 448 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 ||||| | |||| ||||| || ||||| || || || | || ||||| | || |||| Sbjct 449 AACAGAGGCTAATTTTTGCTGGGAAACAGCTTGAGGATGGCCGGACTTTGGCAGACTACA 508 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 | || || || || | ||| | || ||||| |||| Sbjct 509 ATATTCAGAAGGAAGCAACACTTCACTTAGTGCTAAG 545 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || || ||||| || || || || || || |||||||| | | Sbjct 559 ATGCAGATTTTTGTCAAGACTCTCACAGGGAAGACAATTACCCTTGAAGTTGAGAGCTCA 618 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| ||| | || | ||||||| || || || || | || || ||||| Sbjct 619 GATACCATTGACAATGTCAAGGC-AAAAATTCAGGATAAGGAGGGCATCCCACCGGATCA 677 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || || || || || || | || || || | |||||||| Sbjct 678 GCAGAGGCTGATCTTTGCTGGTAAGCAGCTTGAGGATGGTCGTACCTTGGCAGATTACAA 737 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || ||||| || | || || || | |||||| | ||||| Sbjct 738 CATTCAGAAGGAGTCGACTCTGCACTTGGTACTGAGGTTGAGGGGAGG 785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338004030446816