Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001678115.1_202016-07-
01] 1,352 sequences; 17,598,654 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq1343 123 2e-23
seq283 100 2e-16
>seq1343
Length=2062
Score = 123 bits (136), Expect = 2e-23
Identities = 146/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
||||||||| ||||| ||||||||||| || ||||| ||||| || || || || || |
Sbjct 1475 AATGCAGATCTTCGTGAAAACCCTCACTGGTAAAACCATCACCCTTGAGGTCGAAGCCTC 1416
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| | || | | || ||| ||| ||||| || ||| | |||||||| ||
Sbjct 1415 GGACACCATCGAGAACGTCAAGTCAAAGATTCAGGACAAGGAGGGTATCCCGCCAGACCA 1356
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||||| | || || || || || ||| |||| || | |||||| | |||| |||||
Sbjct 1355 ACAGCGTCTTATTTTCGCTGGTAAGCAATTGGAGGATGGTCGCACTCTGAGCGACTACAA 1296
Query 23790 CATACAAAAAGAGTCCAC 23807
|| || || ||||||||
Sbjct 1295 TATCCAGAAGGAGTCCAC 1278
Score = 122 bits (134), Expect = 6e-23
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || ||||| | || ||||| || ||||| |||||||| || || ||
Sbjct 562 ATGCAGATTTTTGTCAAAACTTTGACTGGAAAGACCATCACCCTCGAAGTGGAGGCCTCG 503
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || ||| ||| ||||| || ||| | || || || |||
Sbjct 502 GACACCATTGACAACGTCAAGTCAAAGATTCAAGACAAGGAGGGTATCCCACCCGACCAA 443
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||| | || || ||||| || ||||| || || | ||||| || |||| ||||||
Sbjct 442 CAGCGTCTCATCTTCGCCGGAAAGCAACTCGAGGAGGGTCGCACCTTGAGCGACTACAAC 383
Query 23791 ATACAAAAAGAGTCCAC 23807
|| |||||||| || ||
Sbjct 382 ATCCAAAAAGAATCAAC 366
Score = 116 bits (128), Expect = 3e-21
Identities = 154/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || ||||| || ||||| || || || || |||||||| || || || || ||
Sbjct 1930 ATGCAAATCTTCGTCAAGACCCTAACTGGTAAGACCATCACTCTTGAGGTCGAGGCCTCG 1871
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || |||| | | ||||| || || | |||||||| ||
Sbjct 1870 GACACCATCGACAATGTCAAGTCAAAGA-TCCAGGACAAGGAGGGCATCCCGCCAGACCA 1812
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | || ||||| ||||| ||| |||| |||| ||||| | ||||||||||
Sbjct 1811 GCAGCGTCTCATTTTTGCTGGCAAGCAATTGGAGGACGGCCGCACCCTGAGCGATTACAA 1752
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820
||| ||||| ||||| || | ||| | |||
Sbjct 1751 CATCCAAAAGGAGTCTACCCTGCATCTTGTT 1721
Score = 114 bits (126), Expect = 9e-21
Identities = 153/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || ||||||||||| || || || ||||| ||||| || || || |
Sbjct 1246 ATGCAGATTTTTGTGAAAACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGGCCTCA 1187
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| |||| ||| | || | || ||| ||||| || || | || ||||| ||
Sbjct 1186 GACACTATTGACAATGTGAAGTC-CAAGATTCAGGACAAGGAGGGAATTCCTCCAGACCA 1128
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| ||| | || ||||| || || ||| |||| |||| |||||| | | || |||||
Sbjct 1127 ACAACGTCTGATCTTTGCTGGTAAGCAATTGGAGGACGGTCGCACTCTCAGTGACTACAA 1068
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819
|| ||||| || || || |||| || ||
Sbjct 1067 TATTCAAAAGGAATCAACCCTACACTTGGT 1038
Score = 111 bits (122), Expect = 1e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || ||| | || || || || || ||||||||||| || | ||
Sbjct 790 ATGCAGATTTTCGTCAAGACCTTGACCGGTAAGACTATTACTCTCGAAGTGGAGGCTTCG 731
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | |||| | ||||| || || | || ||||| ||
Sbjct 730 GACACGATCGACAATGTCAAGTCGAAAA-TCCAGGACAAGGAGGGCATCCCCCCAGACCA 672
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||||||| || |||||||| || || || ||||| | |||||| | | || |||||
Sbjct 671 ACAGCGTTTGATCTTTGCCGGAAAGCAGCTCGAAGATGGTCGCACTCTCAGTGACTACAA 612
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||| ||
Sbjct 611 CATCCAGAAGGAGTCAAC 594
Score = 107 bits (118), Expect = 1e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || || || || || ||||| || ||||| ||||| || || || || || |
Sbjct 1018 ATGCAAATCTTTGTCAAGACACTCACTGGTAAAACTATCACCCTAGAGGTCGAGGCCTCA 959
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | ||||| || || ||||| || || | || ||||| |||
Sbjct 958 GACACCATCGATAATGTAAAATCGAAGATCCAAGACAAGGAGGGAATTCCTCCAGACCAA 899
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|| ||| | || || ||||| || |||||||| |||| ||||| | |||||||||||
Sbjct 898 CAACGTCTGATCTTCGCCGGTAAGCAACTGGAGGACGGCCGCACCCTGAGCGATTACAAC 839
Query 23791 ATACAAAAAGAGTCCAC 23807
|| ||||| ||||||||
Sbjct 838 ATCCAAAAGGAGTCCAC 822
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || |||||||||||||| || ||||| ||||| || || || |
Sbjct 1702 ATGCAGATCTTCGTCAAGACCCTCACGGGAAAGACCATCACCCTCGAGGTGGAGGCCTCA 1643
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || || || ||||| || ||| | || || || |||
Sbjct 1642 GACACCATTGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCACCCGACCAA 1583
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||| | || || || || || ||||| || ||| | |||||| | | || ||||||
Sbjct 1582 CAGCGTCTCATTTTCGCTGGTAAGCAACTCGAGGACAACCGCACTCTGAGTGACTACAAC 1523
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || || || ||
Sbjct 1522 ATTCAGAAGGAATCAAC 1506
>seq283
Length=1109
Score = 100 bits (110), Expect = 2e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || ||||| ||||| || || || || || ||||| || || || || | |
Sbjct 103 ATGCAAATCTTCGTGAAAACTCTAACTGGCAAGACCATCACCCTTGAGGTCGAGAGCTCT 162
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| |||| ||| | || | || | | ||||| || ||| | || || || ||
Sbjct 163 GACACTATTGATAATGTCAAGGCCAAGA-TCCAGGACAAGGAGGGTATTCCCCCGGACCA 221
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || ||||| ||||| || || || || | ||||| | | ||||||||
Sbjct 222 GCAGAGGTTGATTTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTTGCTGATTACAA 281
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
||| ||||||||| ||| | || ||||| | ||| || ||||||||
Sbjct 282 CATTCAAAAAGAGAGCACTCTTCACTTAGTGCTCAGGCTGAGAGGAGGA 330
Score = 100 bits (110), Expect = 2e-16
Identities = 154/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||||||||| ||||| |||||||| ||||| || || || || || || || | |
Sbjct 330 AATGCAGATTTTTGTTAAGACCCTCACTGGAAAGACTATTACCCTTGAGGTGGAAAGCTC 389
Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
||||| |||| ||| | || | || || ||||| |||||| | || ||||| |
Sbjct 390 TGACACCATTGACAATGTCAAGTC-CAAGATCCAAGACAAGGAAGGTATTCCTCCAGACC 448
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
||||| | |||| ||||| || ||||| || || || | || ||||| | || ||||
Sbjct 449 AACAGAGGCTAATTTTTGCTGGGAAACAGCTTGAGGATGGCCGGACTTTGGCAGACTACA 508
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
| || || || || | ||| | || ||||| ||||
Sbjct 509 ATATTCAGAAGGAAGCAACACTTCACTTAGTGCTAAG 545
Score = 89.7 bits (98), Expect = 3e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || || || ||||| || || || || || || |||||||| | |
Sbjct 559 ATGCAGATTTTTGTCAAGACTCTCACAGGGAAGACAATTACCCTTGAAGTTGAGAGCTCA 618
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || |||| ||| | || | ||||||| || || || || | || || |||||
Sbjct 619 GATACCATTGACAATGTCAAGGC-AAAAATTCAGGATAAGGAGGGCATCCCACCGGATCA 677
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || ||||| || || || || || || | || || || | ||||||||
Sbjct 678 GCAGAGGCTGATCTTTGCTGGTAAGCAGCTTGAGGATGGTCGTACCTTGGCAGATTACAA 737
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| || || ||||| || | || || || | |||||| | |||||
Sbjct 738 CATTCAGAAGGAGTCGACTCTGCACTTGGTACTGAGGTTGAGGGGAGG 785
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338004030446816
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |