Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01- 04] 879 sequences; 40,986,545 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq44 96.9 4e-15 >seq44 Length=30807 Score = 96.9 bits (106), Expect = 4e-15 Identities = 194/287 (68%), Gaps = 3/287 (1%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || || ||||| ||| ||| | |||||||| ||||||||||| ||||| Sbjct 22815 ATGTAGGTGTCAATGAGGAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGG 22874 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| ||||| ||||| || | || || || || || |||||| || | || Sbjct 22875 AAACCGTAGAAGCAGCGGGCCTCGGGAATCTGGACCTCGGCGCTGAATCGCTCAACGAGG 22934 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 || ||||| || || |||||| |||||||| || || | || || | |||||| Sbjct 22935 TTCTCGTTGACAATACCGTCGGAGGCGGCGAAGAAGGCGAGAATGTGAGAGACGAAATAC 22994 Query 17414 TTTTCGTCCGGTGTAAG---AACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCT 17470 || ||||| | || | |||||| | | ||| ||||| | ||| | || Sbjct 22995 TTCTCGTCATCATTGAGCTTGTTGTTCCAGTCGTGGAGATCCTTGGAAAGATCGATCTCC 23054 Query 17471 TCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517 || | |||||| ||| ||| | ||||| || ||||| | ||| || Sbjct 23055 TCAGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCAGAT 23101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517539913467720