Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01-
04] 879 sequences; 40,986,545 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq802 194 2e-44
seq44 86.0 7e-12
>seq802
Length=124424
Score = 194 bits (214), Expect = 2e-44
Identities = 709/1098 (65%), Gaps = 34/1098 (3%)
Strand=Plus/Minus
Query 53597 GGATAATAATTAATATCTATAATTTTATTGAGGTTTCTGACAATTACTTTGACCACATCC 53656
|| || || || | ||| || || |||||||| |||| ||||| |||||| || ||
Sbjct 51326 GGGTAGTAGTTGACATCAATGATCTTATTGAGATTTCGGACAACGACTTTGGTTACTTCG 51267
Query 53657 TTCAGTTTGAGAAAATCAAATTGTCCATC----TATT--ACAAACATGTTCAATGCAATA 53710
| ||||| ||| || | | || | || | || ||| | ||| ||||
Sbjct 51266 TGGAGTTTCTCAAAGTCGTACTCGCCCTTGTTGTAGTCGACGAACGAGGGCAAGGCAAGC 51207
Query 53711 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 53770
||||||| || || || || || || | | | | | ||| | || ||||| |||||
Sbjct 51206 GATGCCAAGTTGCAGACCGCCACTTCGTCCGGAGCTGAATACTCGATGATCTCGGTGCAG 51147
Query 53771 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 53830
||||| | ||| || || | || | ||| || ||||| ||| || ||||
Sbjct 51146 AGATTGGAGCTGCGGATAGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCC 51087
Query 53831 TTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACG 53890
|||||||| ||||| || | || ||||| |||| | || | || || | |||||
Sbjct 51086 TTATAAAGCATGAAAGGATTTCCTGTTTCGGTCTGTGCCTCCAAGATGGCGTACCAGAGC 51027
Query 53891 ACACGAGCCTTTATTATAGATTTGTATCT----CTTTTCTCTTTCGTATAGTGTATACAA 53946
||||||| | || ||| | | || || | ||||| | ||||||
Sbjct 51026 TTCTGAGCCTTGAG---AGTCTTGCGGCCGCGACCTTCCT-TCTCGTACTTTTCATACAA 50971
Query 53947 TCGTTCAAACTCGTCTCCCCAAA-CATTGTCCAAT-CCAGGACATTCATCCGGACACATC 54004
|||||||| ||| ||| | || | ||| || || ||||| | || ||||||
Sbjct 50970 GGCCTCAAACTC--CTCACCATAGCAGTCGGCAAGGCCGGGGCATTCGTTAGGGCACATC 50913
Query 54005 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 54064
| | ||| || |||| | | ||||||||||| || ||||| || ||||| || ||
Sbjct 50912 AGGGTCCAGTCGCCGTTCTTTTCAACTCGTTTCATGAAAAGATCGGGGATCCAGAGTGCG 50853
Query 54065 ATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 54124
| || | ||| | || || | || || || || |||||| |||||| | ||||
Sbjct 50852 AGGAACAAATCACGGGCTCGAATCTCTTCCTTGCCGTGATTCTTGCGAAGATCCAAGAAC 50793
Query 54125 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTT 54184
| | | ||| | ||||| || || | ||| |||| | |||| ||||| || ||
Sbjct 50792 TCGAATACATCTGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCTCCCGGCCGCTTATTG 50733
Query 54185 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 54244
|| || || || | ||| || || ||||| || | || | | ||| |||||||| ||
Sbjct 50732 CCACCTTGGTCAACGTACCTGGCTGTGTTGTTGAAGACACGAAGCATGGGAATAATGCCG 50673
Query 54245 TTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT 54304
||||| | || || ||||| | ||||| || |||||||||| | ||
Sbjct 50672 TTGGACGTTCCGTTTGTCCCCGCAATATATGAGCCTGTGGCACGAATGCGATGGATGTTG 50613
Query 54305 AGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 54364
|| || || || || |||||||| ||||| | ||||||| || || || ||||| ||
Sbjct 50612 AGGCCGATGCCACCGGCCATTTTTGAGATCATTGCGCATGTCTTCAATGTGTCATAAATT 50553
Query 54365 CCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTA 54424
||||| ||||| |||||| |||||| | || || || |||| ||| |
Sbjct 50552 CCCTCAATACTGTCATCCTTCATGTCGACGAGGAAGCACGAGGACAACTGGGCTTGGGGT 50493
Query 54425 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 54484
|| || || ||||| | || || ||||| || || || |||| || | |||||||
Sbjct 50492 GTGCCGGCGTTAAAGAGAGTGGGTGAAGCATGGGTGAAGAATTTGGACGACATTAGATTG 50433
Query 54485 TACGTCTCGAT----AGCTGA--GTCTATATCCCATTGATGAATTCCTACTGCGACACGC 54538
|||||||| || ||| | ||| || ||| ||| || || |||||||||
Sbjct 50432 TACGTCTCAATCACACGCTCAACGTC-ATCGCCC-----CAAATACCAACAGCGACACGC 50379
Query 54539 ATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTT 54598
|| | |||||||||||||| || || ||||| | | ||||| | ||| || |
Sbjct 50378 ATGATCATGTGCTGAGGTCGCTCGACAATCTTCCCATCGAGCTTCAGGAGGTACGACCGT 50319
Query 54599 TCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACTG 54656
|| | || || || || || || | ||| ||||| || | ||||| | ||| |||
Sbjct 50318 TCGAGGGTCTTGAAGCCGAAGTATTGGTAATTGAAA--TCCCTGTCGTAGACAATGGCTG 50261
Query 54657 AGTTGAGTTTATCCTTAT 54674
| | || | |||||||
Sbjct 50260 AATCAAGCTCCTCCTTAT 50243
>seq44
Length=30807
Score = 86.0 bits (94), Expect = 7e-12
Identities = 106/145 (73%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194
|| ||||| ||| || ||||||||||| | || | || ||||| || |||||
Sbjct 22470 CACGCGAAGTCGGTATGGAGACCCTCGTCACGGGAGATGAGCTCATTGGAGAAGGTGAGG 22529
Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254
|| ||||| ||||||||||| || ||||| || ||||| || || | || |||||
Sbjct 22530 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAAGCACCGCTGAAGAAG 22589
Query 24255 ATTCCTTCTACTGCCGCAAAGGCAA 24279
|| ||||| || || ||||||||||
Sbjct 22590 ATACCTTCGACGGCGGCAAAGGCAA 22614
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593715076483920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |