Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01-
04] 879 sequences; 40,986,545 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq794 120 3e-22
seq754 109 5e-19
seq404 109 5e-19
>seq794
Length=142894
Score = 120 bits (132), Expect = 3e-22
Identities = 147/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || |||||||||||||| | ||||| ||| || ||||| || |||
Sbjct 83855 GTGGACTCCTTCTGAATGTTGTAATCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTACCA 83796
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||||||||| || ||||||||||| ||||||||||| || ||| || ||
Sbjct 83795 GCAAAGATGAGACGTTGTTGATCGGGAGGGATGCCCTCCTTATCCTGAATCTTGGACTTG 83736
Query 118662 ACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720
|| | |||| ||| |||| || | || || |||| ||| | ||| ||||| || |||||
Sbjct 83735 ACGTTGTCGATGGTATCCGATGAT-TCAACTTCGAGGGTAATCGTCTTGCCAGTAAGAGT 83677
Query 118721 TTTTACAAAAATCTGCAT 118738
|| || || ||||||||
Sbjct 83676 CTTCACGAAGATCTGCAT 83659
Score = 109 bits (120), Expect = 5e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595
|||| || ||||| || || || |||||||| | ||| || ||||| |||||
Sbjct 84089 TGGAGCGTGGACTCCTTCTGGATATTGTAATCAGAAAGAGTACGGCCGTCCTCAAGCTGC 84030
Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655
|| || ||| | |||||||||||||||||||| || || ||||||||||| ||| ||
Sbjct 84029 TTGCCGGCGAAAATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCCTGAATCTTC 83970
Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715
|| || | |||| ||| |||| ||| || |||| || | || ||||||||
Sbjct 83969 GACTTCACATTGTCGATGGTATCCGAAGACTCAACTTCGAGCGTAATAGTCTTGCCGGTA 83910
Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738
|| || || ||||| ||||||||
Sbjct 83909 AGGGTCTTGACAAAGATCTGCAT 83887
Score = 87.8 bits (96), Expect = 2e-12
Identities = 123/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| || || || ||||| |||||||| | || || ||||| ||||| || |||
Sbjct 83318 GTGGATTCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCCGTCCTCAAGCTGCTTGCCA 83259
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| | || || |||||||| ||||| || |||||||||||||| || || ||
Sbjct 83258 GCGAAAATCAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTG 83199
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| | |||| ||| || | | ||||||||||| ||| | || ||||||||
Sbjct 83198 ACATTGTCGATGGTATCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 83146
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| |||| || ||||| || || || ||||| ||| | ||||| ||||||
Sbjct 83639 ACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCCTCA 83580
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || || ||| | || | || || || || ||||| || ||||||||||| |
Sbjct 83579 AGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCCTGA 83520
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| |||||| | ||| ||||||| ||| | || |||
Sbjct 83519 ATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCAACCTCGAGGGTGATGGTCTTG 83460
Query 118710 CCGGTCAGAGTTTTTAC 118726
||||| ||||| || ||
Sbjct 83459 CCGGTAAGAGTCTTGAC 83443
>seq754
Length=106820
Score = 109 bits (120), Expect = 5e-19
Identities = 132/180 (73%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| ||||| |||||||| | ||||| |||||||||||| ||||| ||| ||||
Sbjct 63406 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATA 63465
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
|||||||| ||||||||||| || ||||||||||| || || || || | |||
Sbjct 63466 AGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCG 63525
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730
| ||||||| | ||||||||| | ||| | || || || || || || || ||||||
Sbjct 63526 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACAAAA 63585
>seq404
Length=95643
Score = 109 bits (120), Expect = 5e-19
Identities = 147/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || || |||||||| ||| | ||||| |||||||||||
Sbjct 37267 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTG 37326
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| || ||| |||| || ||||| || ||||| || |||||||||||||| || ||
Sbjct 37327 CTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTT 37386
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| ||||||| | ||||||||| | ||| | || ||||| ||
Sbjct 37387 GGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 37446
Query 118715 CAGAGTTTTTACAAAAATCTGCATG 118739
|| || || || || || ||||||
Sbjct 37447 TAGGGTCTTGACGAAGATTTGCATG 37471
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433825752456268
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |