Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01- 04] 879 sequences; 40,986,545 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq404 114 1e-20 seq794 107 2e-18 seq754 87.8 2e-12 >seq404 Length=95643 Score = 114 bits (126), Expect = 1e-20 Identities = 143/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | || || || |||| || |||||||| || ||||| Sbjct 37279 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 37338 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||| ||||||| || | || |||||||||| ||| || |||| | Sbjct 37339 GATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 37398 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| || || || || | |||||||| ||||||||||| ||||| || Sbjct 37399 GTCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGAC 37458 Query 43172 AAAGATTTGCATTTTT 43187 ||||||||||| ||| Sbjct 37459 GAAGATTTGCATGTTT 37474 >seq794 Length=142894 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || ||||||||||||| ||||| || |||| || |||||||| || ||||| Sbjct 84078 CTCCTTCTGGATATTGTAATCAGAAAGAGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAA 84019 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 ||||| |||||||| |||| || | | |||||||||| ||| | || | || | Sbjct 84018 AATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCC-TGAATCTTCGACTTCACAT 83960 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | || || || || || |||| ||| || || ||||| || || ||||| | Sbjct 83959 TGTCGATGGTATCCGAAGACTCAACTTCGAGCGTAATAGTCTTGCCGGTAAGGGTCTTGA 83900 Query 43171 CAAAGATTTGCAT 43183 ||||||| ||||| Sbjct 83899 CAAAGATCTGCAT 83887 Score = 98.7 bits (108), Expect = 1e-15 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| |||||||||||||||| || || || |||| || |||||||| |||||||| Sbjct 83312 TCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCGAAA 83253 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099 || || ||||||||||||| || | || |||||||||| ||| || Sbjct 83252 ATCAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTT 83206 Score = 96.9 bits (106), Expect = 4e-15 Identities = 141/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| |||||||||| || || || | || || |||||||||||||| || Sbjct 83850 CTCCTTCTGAATGTTGTAATCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAA 83791 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 ||||| || || || |||| || | || |||||| ||| ||| | || | |||| || Sbjct 83790 GATGAGACGTTGTTGATCGGGAGGGATGCCCTCCTTATCC-TGAATCTTGGACTTGA-CG 83733 Query 43111 TCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | | | || || ||||| || |||| || || || ||||| || || ||||| Sbjct 83732 TTGTCGATGGTATCCGATGATTCAACTTCGAGGGTAATCGTCTTGCCAGTAAGAGTCTTC 83673 Query 43170 ACAAAGATTTGCAT 43183 || ||||| ||||| Sbjct 83672 ACGAAGATCTGCAT 83659 >seq754 Length=106820 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| |||||||||||||||| || || || | || || |||||||| || ||||| | Sbjct 63404 CCTTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 63463 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | || ||||| || |||| || | | |||||||||| ||| || || | | Sbjct 63464 TAAGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGGATCTTGGACTTCACATTGT 63523 Query 43114 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 43173 | | |||||| || || || || | |||||||| || ||||| || ||||| |||| Sbjct 63524 CGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACAA 63583 Query 43174 A 43174 | Sbjct 63584 A 63584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571811317154120