Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01-
04] 879 sequences; 40,986,545 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq794 114 8e-21
seq404 114 8e-21
>seq794
Length=142894
Score = 114 bits (126), Expect = 8e-21
Identities = 140/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| || ||||| || || || |||| |||| || | ||||||||| ||||||
Sbjct 84077 TCCTTCTGGATATTGTAATCAGAAAGAGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAAA 84018
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
||||| |||||||| ||| ||| | | ||||||||| ||||| ||| | || |
Sbjct 84017 ATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCCTGAATCTTCGACTTCACATTG 83958
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | ||| | || || || || | ||| || || |||||||| || || || |||
Sbjct 83957 TCGATGGTATCCGAAGACTCAACTTCGAGCGTAATAGTCTTGCCGGTAAGGGTCTTGACA 83898
Query 34379 AAGATCTGCAT 34389
|||||||||||
Sbjct 83897 AAGATCTGCAT 83887
Score = 104 bits (114), Expect = 2e-17
Identities = 125/170 (74%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
||| ||||| || ||||| || || || ||| |||| || | ||||||||| |||||
Sbjct 83313 TTCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 83254
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
||| || |||||||||||| ||| | || ||||||||| ||||| ||| | ||
Sbjct 83253 AATCAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACATT 83194
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGA 34367
| | || | ||| | || ||||| || | |||||||| ||||||||||
Sbjct 83193 GTCGATGGTATCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGA 83144
Score = 84.2 bits (92), Expect = 1e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| || ||||||||||| || ||| | || || | ||||||||| ||||||
Sbjct 83621 TCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAA 83562
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
|| | || || ||||| || | | ||||||||| ||||| ||| | || |
Sbjct 83561 ATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTCGACTTGACATTG 83502
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| || | |||| ||| || || || | |||||||| |||||||| ||||| || ||
Sbjct 83501 TCGATGGTGTCGGACGACTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGAGTCTTGAC 83443
Score = 84.2 bits (92), Expect = 1e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| |||||||| || || || ||| | || |||| |||||| || || ||
Sbjct 83849 TCCTTCTGAATGTTGTAATCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAG 83790
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
||||| || || || ||| || | || |||||| || ||||| ||| | | |
Sbjct 83789 ATGAGACGTTGTTGATCGGGAGGGATGCCCTCCTTATCCTGAATCTTGGACTTGACGTTG 83730
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | ||| | ||||| || || | || || || ||||| || ||||| |||||
Sbjct 83729 TCGATGGTATCCGATGATTCAACTTCGAGGGTAATCGTCTTGCCAGTAAGAGTCTTCACG 83670
Query 34379 AAGATCTGCAT 34389
|||||||||||
Sbjct 83669 AAGATCTGCAT 83659
>seq404
Length=95643
Score = 114 bits (126), Expect = 8e-21
Identities = 140/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| |||||||||||||| || ||| |||| || | ||||||||| |||||
Sbjct 37280 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 37339
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
|| || ||||| |||||| ||| | || ||||||||| ||||| ||| | || |
Sbjct 37340 ATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 37399
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| |||| || | || ||||| || | |||||||| ||||| || || || || ||
Sbjct 37400 TCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACG 37459
Query 34379 AAGATCTGCAT 34389
||||| |||||
Sbjct 37460 AAGATTTGCAT 37470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323068538990240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |