Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01- 04] 879 sequences; 40,986,545 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq794 114 8e-21 seq404 114 8e-21 >seq794 Length=142894 Score = 114 bits (126), Expect = 8e-21 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| || ||||| || || || |||| |||| || | ||||||||| |||||| Sbjct 84077 TCCTTCTGGATATTGTAATCAGAAAGAGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAAA 84018 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| |||||||| ||| ||| | | ||||||||| ||||| ||| | || | Sbjct 84017 ATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCCTGAATCTTCGACTTCACATTG 83958 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | ||| | || || || || | ||| || || |||||||| || || || ||| Sbjct 83957 TCGATGGTATCCGAAGACTCAACTTCGAGCGTAATAGTCTTGCCGGTAAGGGTCTTGACA 83898 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 83897 AAGATCTGCAT 83887 Score = 104 bits (114), Expect = 2e-17 Identities = 125/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| || ||||| || || || ||| |||| || | ||||||||| ||||| Sbjct 83313 TTCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 83254 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 ||| || |||||||||||| ||| | || ||||||||| ||||| ||| | || Sbjct 83253 AATCAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACATT 83194 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGA 34367 | | || | ||| | || ||||| || | |||||||| |||||||||| Sbjct 83193 GTCGATGGTATCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGA 83144 Score = 84.2 bits (92), Expect = 1e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| || ||||||||||| || ||| | || || | ||||||||| |||||| Sbjct 83621 TCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAA 83562 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || | || || ||||| || | | ||||||||| ||||| ||| | || | Sbjct 83561 ATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTCGACTTGACATTG 83502 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | || | |||| ||| || || || | |||||||| |||||||| ||||| || || Sbjct 83501 TCGATGGTGTCGGACGACTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGAGTCTTGAC 83443 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||| || || || ||| | || |||| |||||| || || || Sbjct 83849 TCCTTCTGAATGTTGTAATCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAG 83790 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| || || || ||| || | || |||||| || ||||| ||| | | | Sbjct 83789 ATGAGACGTTGTTGATCGGGAGGGATGCCCTCCTTATCCTGAATCTTGGACTTGACGTTG 83730 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | ||| | ||||| || || | || || || ||||| || ||||| ||||| Sbjct 83729 TCGATGGTATCCGATGATTCAACTTCGAGGGTAATCGTCTTGCCAGTAAGAGTCTTCACG 83670 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 83669 AAGATCTGCAT 83659 >seq404 Length=95643 Score = 114 bits (126), Expect = 8e-21 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||||||||| || ||| |||| || | ||||||||| ||||| Sbjct 37280 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 37339 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || ||||| |||||| ||| | || ||||||||| ||||| ||| | || | Sbjct 37340 ATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 37399 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | |||| || | || ||||| || | |||||||| ||||| || || || || || Sbjct 37400 TCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACG 37459 Query 34379 AAGATCTGCAT 34389 ||||| ||||| Sbjct 37460 AAGATTTGCAT 37470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323068538990240