Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01-
04] 879 sequences; 40,986,545 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq404 122 7e-23
seq794 104 2e-17
>seq404
Length=95643
Score = 122 bits (134), Expect = 7e-23
Identities = 155/212 (73%), Gaps = 1/212 (0%)
Strand=Plus/Plus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| || ||| ||||||||| |||||||||||| || ||| |||| || || ||
Sbjct 37267 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTG 37326
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|| |||||||| |||| |||||||||||||| || | |||||||||||| || ||
Sbjct 37327 CTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTT 37386
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
||| || | | ||||| ||| ||||| | ||| || |||||||||||
Sbjct 37387 GGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 37446
Query 45313 CAGAGTCTTCACAAAGATTTGCATG-TTGCCT 45343
|| ||||| || |||||||||||| ||||||
Sbjct 37447 TAGGGTCTTGACGAAGATTTGCATGTTTGCCT 37478
>seq794
Length=142894
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| || |||||| ||||||||| || ||||||||| || ||| | || ||
Sbjct 83639 ACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCCTCA 83580
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || |||||||| ||||| || |||||||| ||||| | ||||||||||||| |
Sbjct 83579 AGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCCTGA 83520
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| ||| ||||| | ||| || ||||||
Sbjct 83519 ATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCAACCTCGAGGGTGATGGTCTTG 83460
Query 45308 CCCGTCAGAGTCTTCAC 45324
|| || |||||||| ||
Sbjct 83459 CCGGTAAGAGTCTTGAC 83443
Score = 93.3 bits (102), Expect = 3e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| || ||| |||||||||||||||||| || || ||| | || ||||| ||
Sbjct 83862 GTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGGGTGCGGCCATCTTCCAGCTG 83803
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|| || || || || | || ||||| |||||||| | |||||||| ||| ||| ||
Sbjct 83802 CTTACCAGCAAAGATGAGACGTTGTTGATCGGGAGGGATGCCCTCCTTATCCTGAATCTT 83743
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
||| || | | | | ||| || || || | ||||||||||||||| ||
Sbjct 83742 GGACTTGACGTTGTCGATGGTATCCGATGATTCAACTTCGAGGGTAATCGTCTTGCCAGT 83683
Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336
||||||||||| ||||| |||||
Sbjct 83682 AAGAGTCTTCACGAAGATCTGCAT 83659
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193
|| |||||| ||||||||| || ||||| || || || |||| || || ||
Sbjct 84089 TGGAGCGTGGACTCCTTCTGGATATTGTAATCAGAAAGAGTACGGCCGTCCTCAAGCTGC 84030
Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253
|| |||||||| || | ||||| || ||||| || | |||||||||||| ||| ||
Sbjct 84029 TTGCCGGCGAAAATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCCTGAATCTTC 83970
Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313
||| || | | | | ||| | ||| || || | ||||| |||||||| ||
Sbjct 83969 GACTTCACATTGTCGATGGTATCCGAAGACTCAACTTCGAGCGTAATAGTCTTGCCGGTA 83910
Query 45314 AGAGTCTTCACAAAGATTTGCAT 45336
|| ||||| |||||||| |||||
Sbjct 83909 AGGGTCTTGACAAAGATCTGCAT 83887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395070967633459
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |