Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01- 04] 879 sequences; 40,986,545 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq802 356 2e-93 seq44 165 7e-36 seq404 96.9 3e-15 seq794 82.4 7e-11 >seq802 Length=124424 Score = 356 bits (394), Expect = 2e-93 Identities = 947/1441 (66%), Gaps = 24/1441 (2%) Strand=Plus/Minus Query 22452 GGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACG 22511 |||| || || || || ||||||| |||||| || |||||||||||||| || ||| | | Sbjct 51781 GGTTGACGACCTGGAATTCGCCGGCCAAGACACGTCGTTGGTAAATGTTCGAGGTGTAGG 51722 Query 22512 GTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCA 22571 |||| ||| |||| ||||| || || || |||| || || || ||||| || |||| Sbjct 51721 GTTCAAAACATTCGTTGTTCCCGAGAATTTGAGATGTGCTTGCAGTGGGCATGGGGGCCA 51662 Query 22572 ACAGTAGCGAGTTTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGCATCGACCAGTC 22629 ||| || || | | ||| |||| |||| | | || ||||||| ||||| Sbjct 51661 ACAAAAGGCTATTACGGACGCCATGCTGCTTGATCTGCTCCTTCAGAGCATC--CCAGTT 51604 Query 22630 CCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGC 22689 ||||| || | ||| | ||||| |||||| ||||| || | | || || | Sbjct 51603 CCACAAGTCCGTGGGCTTGACATT---CCACATGTCGTACTGGAGAATACCTTGAGAGAC 51547 Query 22690 CGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTC 22749 || || |||||||| || || || | | ||| | || |||||| Sbjct 51546 AGGAGAACCCTCGTACGTCGAATAAGGGCCCTGCTCCTTGGCGATCTCCATTGACGCCTC 51487 Query 22750 CAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCT 22809 || || | | || || ||||| ||||||| | || | | ||| || | Sbjct 51486 CAGAGCCGCATGGTAGATTGTCTCAAAGATTTGAATATTAAGCTGTCGGGCCTCGGGGGA 51427 Query 22810 TTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGAT 22869 ||| | ||||| |||| | ||| || ||||||| ||| || ||||||| ||| || Sbjct 51426 CTCGAAGGGCATGCGCAGGGCAAGGAAGGCATCCGCCAAACCTTGCACGCCTACACCAAT 51367 Query 22870 CGGTCGGTTTTTCAGATTCGACACTTTTGC----CTCGGGCAAAGGATACCAATTCGAAT 22925 || |||| || || || |||| ||| | | || || | || || Sbjct 51366 GGGCCGGTGGCGCATGTTG----CTGTTGCGGGCCTCCTGTACCGGGTAGTAGTTGACAT 51311 Query 22926 CGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGT 22985 | || | | || | |||| | || | ||| |||| ||||||| Sbjct 51310 CAATGATCTTATTGAGATTTCGGACAACGACTTTGGTTACTTCGTGGAGTTTCTCAAAGT 51251 Query 22986 CGTAAACGCCCGA-TTGTA--CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATA 23042 |||| ||||| ||||| | || ||| | | ||| | ||| || | ||||| | Sbjct 51250 CGTACTCGCCCTTGTTGTAGTCGACGAACGAGGGCAAGGCAAGCGATGCCAAGTTGCAGA 51191 Query 23043 CGGCCACCTCGTCTTTGGACGTG--TACTCTACAATTTCGGTACATAGATTGCTACACTT 23100 | ||||| ||||| ||| || ||||| | || ||||| || |||||| | Sbjct 51190 CCGCCACTTCGTCC--GGAGCTGAATACTCGATGATCTCGGTGCAGAGATTGGAGCTGCG 51133 Query 23101 TATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTA 23160 || || || | || | |||||||| || || ||||| |||||| || |||||| | Sbjct 51132 GATAGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTATAAAGCATGAA 51073 Query 23161 CGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAAC 23220 || | || || ||| ||| | ||| | ||| || ||| | ||||||| | | Sbjct 51072 AGGATTTCCTGTTTCGGTCTGTGCCTCCAAGATGGCGTACCAGAGCTTCTGAGCCTTGAG 51013 Query 23221 ACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCAC 23279 | ||| || | | ||||| | ||||||||||| ||||| || ||||| || ||| Sbjct 51012 A-GTCTTGCGGCCGCGACCTTCCTTCTCGTACTTTTCATACAAGGCCTCAAACTCCTCAC 50954 Query 23280 CGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCAT 23339 | || |||||||| |||||||| ||| | || ||||| || |||| || | Sbjct 50953 CATAGCAGTCGGCAAGGCCGGGGCATTCGTTAGGGCACATCAGGGTCCAGTCGCCGTTCT 50894 Query 23340 TTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGC 23399 ||||||| ||| |||| |||||||| || ||||| || ||| ||||| || ||||| | Sbjct 50893 TTTCAACTCGTTTCATGAAAAGATCGGGGATCCAGAGTGCGAGGAACAAATCACGGGCTC 50834 Query 23400 GCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCC 23459 | | ||| || |||||| ||||| | |||||| || || || || || || |||| Sbjct 50833 GAATCTCTTCCTTGCCGTGATTCTTGCGAAGATCCAAGAACTCGAATACATCTGCGTGCC 50774 Query 23460 ACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAAC 23519 | ||||| ||||| | |||||| || ||||| | ||||||||| || || || ||||| | Sbjct 50773 ATGGCTCAAGGTAGATGGCAAAGGCTCCCGGCCGCTTATTGCCACCTTGGTCAACGTACC 50714 Query 23520 GGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGC 23579 ||| ||||||||| | || | ||||| || | | |||||||||| ||| | | Sbjct 50713 TGGCTGTGTTGTTGAAGACACGAAGCATGGGAATAATGCCGTTGGACGTTCCGTTTGTCC 50654 Query 23580 CCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCG 23639 |||| | | || ||| | || |||| | || | || || || ||||| ||| || Sbjct 50653 CCGCAATATATGAGCCTGTGGCACGAATGCGATGGATGTTGAGGCCGATGCCACCGGCCA 50594 Query 23640 ATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTT 23699 ||| || ||||| |||||| |||| ||||| || || ||||| || ||||| || | Sbjct 50593 TTTTTGAGATCATTGCGCATGTCTTCAATGTGTCATAAATTCCCTCAATACTGTCATCCT 50534 Query 23700 TGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTG 23759 | | |||| | ||| ||||| |||| || |||| ||| || |||| || || | Sbjct 50533 TCATGTCGACGAGGAAGCACGAGGACAACTGGGCTTGGGGTGTGCCGGCGTTAAAGAGAG 50474 Query 23760 TCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCAT 23819 | || || || || ||| || |||||||||||||||||| || || | | Sbjct 50473 TGGGTGAAGCATGGGTGAAGAATTTGGACGACATTAGATTGTACGTCTCAATCACACGCT 50414 Query 23820 CAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGA 23879 ||| ||| || || ||||| | ||||| ||||| ||||||| ||||||| ||||| Sbjct 50413 CAACGTCATCGCCCCAAATACCAACAGCGACACGCATGATCATGTGCTGAGGTCGCTCGA 50354 Query 23880 C 23880 | Sbjct 50353 C 50353 >seq44 Length=30807 Score = 165 bits (182), Expect = 7e-36 Identities = 328/479 (68%), Gaps = 14/479 (3%) Strand=Plus/Minus Query 57956 GGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGG 58015 |||||| ||||| || | || | || || ||||||||||||||||| ||||| || Sbjct 22637 GGCCACCTTCGCGCAGCGCCTCGTTGCCTTTGCCGCCGTCGAAGGTATCTTCTTCAGCGG 22578 Query 58016 CAGCTTT-GCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTA 58074 ||||| || | || || ||| | ||||| || ||||| ||||| ||||| || || Sbjct 22577 T-GCTTTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTCACCTTCT 22519 Query 58075 GCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACT 58134 ||| ||| | || || || ||||||||||||||||| || || |||||||| ||| || Sbjct 22518 CCAATGAGCTCATCTCCCGTGACGAGGGTCTCCATACCGACTTCGCGTGCCTCCTGTTCT 22459 Query 58135 CTCACATTGTCAATAAACCGACGCG----GGATCGCATCTTGGACATTATCACCGAGGCG 58190 | ||| |||| |||| | || | | | |||| ||| || |||||||| || Sbjct 22458 CCCAC---CTCAA-GCACCGCCCCGACAAGCAGCTCATCAAGGATATCATCACCGATGCC 22403 Query 58191 GTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAAC 58250 ||| |||||| | ||||| |||| || ||||| || ||| ||||||| |||||| Sbjct 22402 GTCAAGATCGAGCAGGAGTTCCTCACGGAGGCCCTCCCCTGTGCCCTGCTCGGCATGAAC 22343 Query 58251 AATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GA 58308 | | ||| ||||||||||||| || |||||||| || | ||| || | Sbjct 22342 GCGAACCTCATGAAGCAGTACATTGAGTTCGTCGCCGACAGGCTGCTCGTCGCCCTCGGC 22283 Query 58309 TTGGAGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCG 58368 |||| || |||| | | || || || || || ||| | ||||| |||| Sbjct 22282 AACGAGAAGATC--TACAGGTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCG 22225 Query 58369 AGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATG 58427 |||||||| ||||| ||||| || ||| | || || || || |||||| ||| Sbjct 22224 GCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAAGGCCGGCGTCATG 22166 >seq404 Length=95643 Score = 96.9 bits (106), Expect = 3e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 ||||||||||||| ||||| ||||| || || ||||| || |||||| | || || || Sbjct 37475 CAAACATGCAAATCTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAGT 37416 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | || |||| |||| | ||||| | || ||||||||| ||| | || |||| Sbjct 37415 CCTCGGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCG 37356 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 |||| ||||| || || ||||| ||||| ||| | || ||| Sbjct 37355 ACCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGAC 37315 >seq794 Length=142894 Score = 82.4 bits (90), Expect = 7e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 31217 ACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAG 31276 || ||||| || |||||| |||| || || | || || | |||| | ||||| | Sbjct 83146 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGATACCATCGACAATGTCAAGTCG 83205 Query 31277 AGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAA 31336 | || ||||||||| ||| | || |||||||||||||| || || ||||||||||| Sbjct 83206 AAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGCCTGATTTTCGCTGGCAAG 83265 Query 31337 CAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCAT 31396 ||| | || ||| || | ||||| || ||||| || ||||| || ||||| Sbjct 83266 CAGCTTGAGGACGGCCGAACCCTTTCTGATTACAATATTCAGAAGGAATCCACCCTTCAC 83325 Query 31397 CTGGTACT 31404 || || || Sbjct 83326 CTTGTTCT 83333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445761502141680