Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01- 04] 879 sequences; 40,986,545 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq802 215 7e-51 seq44 87.8 2e-12 >seq802 Length=124424 Score = 215 bits (238), Expect = 7e-51 Identities = 651/993 (66%), Gaps = 32/993 (3%) Strand=Plus/Minus Query 65628 GGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCC 65687 || || || || | ||| || || ||||||||||||| ||||| |||||| || || Sbjct 51326 GGGTAGTAGTTGACATCAATGATCTTATTGAGATTTCGGACAACGACTTTGGTTACTTCG 51267 Query 65688 TTCAGTTTGAGAAAATCAAA-TCGCTCATCTATTA-----CAAACATGTTCAATGCAACA 65741 | ||||| ||| || | |||| | | | || | ||| | ||| |||| Sbjct 51266 TGGAGTTTCTCAAAGTCGTACTCGCCCTTGTTGTAGTCGACGAACGAGGGCAAGGCAAGC 51207 Query 65742 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 65801 ||||||| || || || || || || | | | | | ||| | || ||||| ||||| Sbjct 51206 GATGCCAAGTTGCAGACCGCCACTTCGTCCGGAGCTGAATACTCGATGATCTCGGTGCAG 51147 Query 65802 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 65861 ||||| | ||| || || | || | ||| || ||||| ||| || |||| Sbjct 51146 AGATTGGAGCTGCGGATAGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCC 51087 Query 65862 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 65921 |||||||| ||||| ||| | || ||||| |||| | || | || || | ||||| | Sbjct 51086 TTATAAAGCATGAAAGGATTTCCTGTTTCGGTCTGTGCCTCCAAGATGGCGTACCAGA-G 51028 Query 65922 ACTC-GAGCCTTTATTATAGATTTGTATCT----CTTTTCTCTTTCGTATAGTGTATACA 65976 || ||||||| | || ||| | | || || | ||||| | ||||| Sbjct 51027 CTTCTGAGCCTTGAG---AGTCTTGCGGCCGCGACCTTCCT-TCTCGTACTTTTCATACA 50972 Query 65977 ATCGTTCGAACTCGTCTCCCCAAA-CATTGTCCAAT-CCAGGACATTCATCCGGACACAT 66034 | || ||||| ||| ||| | || | ||| || || ||||| | || ||||| Sbjct 50971 AGGCCTCAAACTC--CTCACCATAGCAGTCGGCAAGGCCGGGGCATTCGTTAGGGCACAT 50914 Query 66035 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 66094 || | ||| || |||| | | ||||||||||| || ||||| || ||||| || || Sbjct 50913 CAGGGTCCAGTCGCCGTTCTTTTCAACTCGTTTCATGAAAAGATCGGGGATCCAGAGTGC 50854 Query 66095 TATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 66154 | || ||||| | || || | || || || || |||||| |||||| | ||| Sbjct 50853 GAGGAACAAATCACGGGCTCGAATCTCTTCCTTGCCGTGATTCTTGCGAAGATCCAAGAA 50794 Query 66155 CGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 66214 | | | | ||| ||||| || || | ||| ||||| | |||| ||||| || || Sbjct 50793 CTCGAATACATCTGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCTCCCGGCCGCTTATT 50734 Query 66215 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 66274 || || || || | ||| || || ||||| || | || | | ||| |||||||| || Sbjct 50733 GCCACCTTGGTCAACGTACCTGGCTGTGTTGTTGAAGACACGAAGCATGGGAATAATGCC 50674 Query 66275 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGA 66334 ||||| || || || ||||| | ||||| || | |||||||| | || Sbjct 50673 GTTGGACGTTCCGTTTGTCCCCGCAATATATGAGCCTGTGGCACGAATGCGATGGATGTT 50614 Query 66335 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 66394 || || || || || |||||||| ||||| | ||||||| || || || ||||| || Sbjct 50613 GAGGCCGATGCCACCGGCCATTTTTGAGATCATTGCGCATGTCTTCAATGTGTCATAAAT 50554 Query 66395 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 66454 ||||| ||||| |||||| |||||| | || || || |||| ||| | Sbjct 50553 TCCCTCAATACTGTCATCCTTCATGTCGACGAGGAAGCACGAGGACAACTGGGCTTGGGG 50494 Query 66455 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 66514 || || || ||||| | || || ||||| || || || |||| || | |||||| Sbjct 50493 TGTGCCGGCGTTAAAGAGAGTGGGTGAAGCATGGGTGAAGAATTTGGACGACATTAGATT 50434 Query 66515 GTACGTCTCAAT----AGCTGA--GTCTATATCCCATTGATGAATTCCTACTGCGACACG 66568 |||||||||||| ||| | ||| || ||| ||| || || |||||||| Sbjct 50433 GTACGTCTCAATCACACGCTCAACGTC-ATCGCCC-----CAAATACCAACAGCGACACG 50380 Query 66569 CATTAACATGTGCTGAGGTCTTTCAACGATCTT 66601 ||| | |||||||||||||| || || ||||| Sbjct 50379 CATGATCATGTGCTGAGGTCGCTCGACAATCTT 50347 >seq44 Length=30807 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/209 (69%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217 || ||||| ||| || ||||||||||| | || | || ||||| || ||||| Sbjct 22470 CACGCGAAGTCGGTATGGAGACCCTCGTCACGGGAGATGAGCTCATTGGAGAAGGTGAGG 22529 Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277 || ||||| ||||||||||| || ||||| || ||||| || || | || ||||| Sbjct 22530 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAAGCACCGCTGAAGAAG 22589 Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGT 36334 || ||||| || || |||||||||| || | || | | || ||| |||| Sbjct 22590 ATACCTTCGACGGCGGCAAAGGCAACGAGGCGCTGCGCGAAGGTGGCCTCACGGTCAGCG 22649 Query 36335 ATCCACTTTTGAGCCCAATCGGCCTTCTT 36363 ||||| ||||||| ||||||||||| Sbjct 22650 ATCCAACGGAGAGCCCAGTCGGCCTTCTT 22678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658165568326360