Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01- 04] 879 sequences; 40,986,545 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq794 140 7e-28 seq754 105 2e-17 >seq794 Length=142894 Score = 140 bits (154), Expect = 7e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || ||||| ||||| || ||||| ||||| | ||||| Sbjct 84098 AGGACGAGATGGAGCGTGGACTCCTTCTGGATATTGTAATCAGAAAGAGTACGGCCGTCC 84039 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || || || ||||| || | ||| ||||| || || ||||| || || ||| Sbjct 84038 TCAAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCC 83979 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| | || ||||| || | |||||| || || || || || ||||||||| Sbjct 83978 TGAATCTTCGACTTCACATTGTCGATGGTATCCGAAGACTCAACTTCGAGCGTAATAGTC 83919 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||| || || ||||| |||||||| Sbjct 83918 TTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 83887 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| || || ||||| || || | || ||||| || || || ||| Sbjct 83855 GTGGACTCCTTCTGAATGTTGTAATCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTACCA 83796 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | |||||||| ||||| || || || |||||||||||||| | || Sbjct 83795 GCAAAGATGAGACGTTGTTGATCGGGAGGGATGCCCTCCTTATCCTGAATCTTGGACTTG 83736 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | |||||| | ||| || || || ||||| ||||| |||||||| || Sbjct 83735 ACGTTGTCGATGGTATCCGATGATTCAACTTCGAGGGTAATCGTCTTGCCAGTAAGAGTC 83676 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 83675 TTCACGAAGATCTGCAT 83659 Score = 102 bits (112), Expect = 2e-16 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| ||||||||||| || ||||| || |||| ||||| || || || || ||| Sbjct 83318 GTGGATTCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCCGTCCTCAAGCTGCTTGCCA 83259 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| || | ||| || || || || || || || || ||||| ||||| | || Sbjct 83258 GCGAAAATCAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTG 83199 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | |||||| | || ||||| || || || ||||| || || | | || Sbjct 83198 ACATTGTCGATGGTATCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGACTATT 83139 Query 104543 T 104543 | Sbjct 83138 T 83138 Score = 100 bits (110), Expect = 7e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || ||||| ||||| ||||| || || || | || || Sbjct 83642 AGGACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCC 83583 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || || || ||||| | | ||||| |||||||| || || || || ||| Sbjct 83582 TCAAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCC 83523 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| | || ||||| || | ||| ||| | || ||||| || || || ||| Sbjct 83522 TGAATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCAACCTCGAGGGTGATGGTC 83463 Query 104528 TTACCAGTAAGTGTTTTTAC 104547 || || ||||| || || || Sbjct 83462 TTGCCGGTAAGAGTCTTGAC 83443 >seq754 Length=106820 Score = 105 bits (116), Expect = 2e-17 Identities = 133/180 (74%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 104372 TTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATT 104431 ||||||||||| || ||||| || || | || || || || || ||||| || || || Sbjct 63406 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATA 63465 Query 104432 AGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCT 104491 || | ||||||||| ||||| ||||| || || ||||| ||||| | || ||||| || Sbjct 63466 AGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCG 63525 Query 104492 ACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550 | || || | ||| || ||||| || || || |||||||| || || || || ||||| Sbjct 63526 ATCGTGTC-CGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACAAA 63584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151385432735332