Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01-
04] 879 sequences; 40,986,545 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq802 224 1e-53
seq44 100 4e-16
>seq802
Length=124424
Score = 224 bits (248), Expect = 1e-53
Identities = 653/993 (66%), Gaps = 32/993 (3%)
Strand=Plus/Minus
Query 62784 GGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCC 62843
|| || || || | ||| || || ||||||||||||| ||||| |||||| || ||
Sbjct 51326 GGGTAGTAGTTGACATCAATGATCTTATTGAGATTTCGGACAACGACTTTGGTTACTTCG 51267
Query 62844 TTCAGTTTGAGAAAATCAAA-TCGCCCATCTATTA-----CAAACATGTTCAAGGCAACA 62897
| ||||| ||| || | |||||| | | || | ||| | ||||||||
Sbjct 51266 TGGAGTTTCTCAAAGTCGTACTCGCCCTTGTTGTAGTCGACGAACGAGGGCAAGGCAAGC 51207
Query 62898 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62957
||||||| || || || || || || | | | | | ||| | || ||||| |||||
Sbjct 51206 GATGCCAAGTTGCAGACCGCCACTTCGTCCGGAGCTGAATACTCGATGATCTCGGTGCAG 51147
Query 62958 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63017
||||| | |||||| || | || | ||| || ||||| ||| || ||||
Sbjct 51146 AGATTGGAGCTGCGGATAGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCC 51087
Query 63018 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 63077
|||||||| ||||| ||| | || ||||| |||| | || | || || | ||||| |
Sbjct 51086 TTATAAAGCATGAAAGGATTTCCTGTTTCGGTCTGTGCCTCCAAGATGGCGTACCAGA-G 51028
Query 63078 ACTC-GAGCCTTTATTATAGATTTGTATCT----CCTTTCTCTTTCGTATAGTGTATACA 63132
|| ||||||| | || ||| | |||| || | ||||| | |||||
Sbjct 51027 CTTCTGAGCCTTGAG---AGTCTTGCGGCCGCGACCTTCCT-TCTCGTACTTTTCATACA 50972
Query 63133 ATCGTTCGAACTCGTCTCCCCAAA-CATTGTCCAAT-CCAGGACATTCATCCGGACACAT 63190
| || ||||| ||| ||| | || | ||| || || ||||| | || |||||
Sbjct 50971 AGGCCTCAAACTC--CTCACCATAGCAGTCGGCAAGGCCGGGGCATTCGTTAGGGCACAT 50914
Query 63191 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 63250
|| | ||| || |||| | | ||||||||||| || ||||| || ||||| || ||
Sbjct 50913 CAGGGTCCAGTCGCCGTTCTTTTCAACTCGTTTCATGAAAAGATCGGGGATCCAGAGTGC 50854
Query 63251 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63310
| || | ||| | || || | || || || || |||||| |||||| | |||
Sbjct 50853 GAGGAACAAATCACGGGCTCGAATCTCTTCCTTGCCGTGATTCTTGCGAAGATCCAAGAA 50794
Query 63311 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63370
| | | | ||| | ||||| || || | ||| ||||| | |||| ||||| || ||
Sbjct 50793 CTCGAATACATCTGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCTCCCGGCCGCTTATT 50734
Query 63371 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63430
|| || || || | ||| || || ||||| || | || | | ||| |||||||| ||
Sbjct 50733 GCCACCTTGGTCAACGTACCTGGCTGTGTTGTTGAAGACACGAAGCATGGGAATAATGCC 50674
Query 63431 GTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 63490
||| || | || || || || | ||||| || |||||||||| | ||
Sbjct 50673 GTTGGACGTTCCGTTTGTCCCCGCAATATATGAGCCTGTGGCACGAATGCGATGGATGTT 50614
Query 63491 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63550
|| || || || || |||||||| ||||| | ||||||| || || |||||||| ||
Sbjct 50613 GAGGCCGATGCCACCGGCCATTTTTGAGATCATTGCGCATGTCTTCAATGTGTCATAAAT 50554
Query 63551 ACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 63610
||||| || || ||||| |||||| | || || || |||| ||| |
Sbjct 50553 TCCCTCAATACTGTCATCCTTCATGTCGACGAGGAAGCACGAGGACAACTGGGCTTGGGG 50494
Query 63611 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63670
|| || || ||||| | || || ||||| || || || |||| || | ||||||
Sbjct 50493 TGTGCCGGCGTTAAAGAGAGTGGGTGAAGCATGGGTGAAGAATTTGGACGACATTAGATT 50434
Query 63671 GTACGTCTCAAT----AGCTGA--GTCTATATCCCATTGATGAATTCCTACTGCGACACG 63724
|||||||||||| ||| | ||| || ||| ||| || || ||||||||
Sbjct 50433 GTACGTCTCAATCACACGCTCAACGTC-ATCGCCC-----CAAATACCAACAGCGACACG 50380
Query 63725 CATTAACATGTGCTGAGGTCTTTCAACGATCTT 63757
||| | |||||||||||||| || || |||||
Sbjct 50379 CATGATCATGTGCTGAGGTCGCTCGACAATCTT 50347
>seq44
Length=30807
Score = 100 bits (110), Expect = 4e-16
Identities = 109/145 (75%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363
|| ||||| ||| || ||||||||||| | || || || ||||| || |||||
Sbjct 22470 CACGCGAAGTCGGTATGGAGACCCTCGTCACGGGAGATGAGCTCATTGGAGAAGGTGAGG 22529
Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423
|| ||||| ||||||||||| || ||||| || ||||| ||||| | || ||||||
Sbjct 22530 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAAGCACCGCTGAAGAAG 22589
Query 33424 ATTCCTTCTACTGCAGCAAAGGCAA 33448
|| ||||| || || ||||||||||
Sbjct 22590 ATACCTTCGACGGCGGCAAAGGCAA 22614
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622940355367640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |