Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01- 04] 879 sequences; 40,986,545 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq802 224 1e-53 seq44 100 4e-16 >seq802 Length=124424 Score = 224 bits (248), Expect = 1e-53 Identities = 653/993 (66%), Gaps = 32/993 (3%) Strand=Plus/Minus Query 62784 GGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCC 62843 || || || || | ||| || || ||||||||||||| ||||| |||||| || || Sbjct 51326 GGGTAGTAGTTGACATCAATGATCTTATTGAGATTTCGGACAACGACTTTGGTTACTTCG 51267 Query 62844 TTCAGTTTGAGAAAATCAAA-TCGCCCATCTATTA-----CAAACATGTTCAAGGCAACA 62897 | ||||| ||| || | |||||| | | || | ||| | |||||||| Sbjct 51266 TGGAGTTTCTCAAAGTCGTACTCGCCCTTGTTGTAGTCGACGAACGAGGGCAAGGCAAGC 51207 Query 62898 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62957 ||||||| || || || || || || | | | | | ||| | || ||||| ||||| Sbjct 51206 GATGCCAAGTTGCAGACCGCCACTTCGTCCGGAGCTGAATACTCGATGATCTCGGTGCAG 51147 Query 62958 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63017 ||||| | |||||| || | || | ||| || ||||| ||| || |||| Sbjct 51146 AGATTGGAGCTGCGGATAGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCC 51087 Query 63018 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 63077 |||||||| ||||| ||| | || ||||| |||| | || | || || | ||||| | Sbjct 51086 TTATAAAGCATGAAAGGATTTCCTGTTTCGGTCTGTGCCTCCAAGATGGCGTACCAGA-G 51028 Query 63078 ACTC-GAGCCTTTATTATAGATTTGTATCT----CCTTTCTCTTTCGTATAGTGTATACA 63132 || ||||||| | || ||| | |||| || | ||||| | ||||| Sbjct 51027 CTTCTGAGCCTTGAG---AGTCTTGCGGCCGCGACCTTCCT-TCTCGTACTTTTCATACA 50972 Query 63133 ATCGTTCGAACTCGTCTCCCCAAA-CATTGTCCAAT-CCAGGACATTCATCCGGACACAT 63190 | || ||||| ||| ||| | || | ||| || || ||||| | || ||||| Sbjct 50971 AGGCCTCAAACTC--CTCACCATAGCAGTCGGCAAGGCCGGGGCATTCGTTAGGGCACAT 50914 Query 63191 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 63250 || | ||| || |||| | | ||||||||||| || ||||| || ||||| || || Sbjct 50913 CAGGGTCCAGTCGCCGTTCTTTTCAACTCGTTTCATGAAAAGATCGGGGATCCAGAGTGC 50854 Query 63251 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63310 | || | ||| | || || | || || || || |||||| |||||| | ||| Sbjct 50853 GAGGAACAAATCACGGGCTCGAATCTCTTCCTTGCCGTGATTCTTGCGAAGATCCAAGAA 50794 Query 63311 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63370 | | | | ||| | ||||| || || | ||| ||||| | |||| ||||| || || Sbjct 50793 CTCGAATACATCTGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCTCCCGGCCGCTTATT 50734 Query 63371 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63430 || || || || | ||| || || ||||| || | || | | ||| |||||||| || Sbjct 50733 GCCACCTTGGTCAACGTACCTGGCTGTGTTGTTGAAGACACGAAGCATGGGAATAATGCC 50674 Query 63431 GTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 63490 ||| || | || || || || | ||||| || |||||||||| | || Sbjct 50673 GTTGGACGTTCCGTTTGTCCCCGCAATATATGAGCCTGTGGCACGAATGCGATGGATGTT 50614 Query 63491 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63550 || || || || || |||||||| ||||| | ||||||| || || |||||||| || Sbjct 50613 GAGGCCGATGCCACCGGCCATTTTTGAGATCATTGCGCATGTCTTCAATGTGTCATAAAT 50554 Query 63551 ACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 63610 ||||| || || ||||| |||||| | || || || |||| ||| | Sbjct 50553 TCCCTCAATACTGTCATCCTTCATGTCGACGAGGAAGCACGAGGACAACTGGGCTTGGGG 50494 Query 63611 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63670 || || || ||||| | || || ||||| || || || |||| || | |||||| Sbjct 50493 TGTGCCGGCGTTAAAGAGAGTGGGTGAAGCATGGGTGAAGAATTTGGACGACATTAGATT 50434 Query 63671 GTACGTCTCAAT----AGCTGA--GTCTATATCCCATTGATGAATTCCTACTGCGACACG 63724 |||||||||||| ||| | ||| || ||| ||| || || |||||||| Sbjct 50433 GTACGTCTCAATCACACGCTCAACGTC-ATCGCCC-----CAAATACCAACAGCGACACG 50380 Query 63725 CATTAACATGTGCTGAGGTCTTTCAACGATCTT 63757 ||| | |||||||||||||| || || ||||| Sbjct 50379 CATGATCATGTGCTGAGGTCGCTCGACAATCTT 50347 >seq44 Length=30807 Score = 100 bits (110), Expect = 4e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || ||||| ||| || ||||||||||| | || || || ||||| || ||||| Sbjct 22470 CACGCGAAGTCGGTATGGAGACCCTCGTCACGGGAGATGAGCTCATTGGAGAAGGTGAGG 22529 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 || ||||| ||||||||||| || ||||| || ||||| ||||| | || |||||| Sbjct 22530 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAAGCACCGCTGAAGAAG 22589 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAA 33448 || ||||| || || |||||||||| Sbjct 22590 ATACCTTCGACGGCGGCAAAGGCAA 22614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622940355367640