Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01- 04] 879 sequences; 40,986,545 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq794 107 1e-18 seq517 105 4e-18 >seq794 Length=142894 Score = 107 bits (118), Expect = 1e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 38114 ATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTG 38173 ||| || ||| |||||| || |||||||||||||| | | ||| |||| || | || Sbjct 84090 ATGGAGCGTGGACTCCTTCTGGATATTGTAATCAGAAAGAGTACGGCCGTCCTCAAGCTG 84031 Query 38174 TTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTT 38233 || ||||| || || || || || ||||||| ||| | || || |||||| ||| || Sbjct 84030 CTTGCCGGCGAAAATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCCTGAATCTT 83971 Query 38234 TTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGT 38293 ||||||||| | || ||||| | |||||||| | |||||||| || || || Sbjct 83970 CGACTTCACATTGTCGATGGTATCCGAAGACTCAACTTCGAGCGTAATAGTCTTGCCGGT 83911 Query 38294 CAAGGTTTTCACGAATATCTGCAT 38317 | ||| || || || |||||||| Sbjct 83910 AAGGGTCTTGACAAAGATCTGCAT 83887 Score = 98.7 bits (108), Expect = 7e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | || | ||||| ||| |||||| ||||| |||||||||| Sbjct 83887 TACCACCACGAAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAG 83828 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | || | || || | || || || ||||| || || ||||||||||||| | Sbjct 83827 AGAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATGAGACGTTGTTGATCGGGAG 83768 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||| || || ||| ||| || ||| || || | || ||||| ||||| Sbjct 83767 GGATGCCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTATCCGATGATTCAA 83708 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| | ||||| || || || || | || |||||||| |||||||| Sbjct 83707 CTTCGAGGGTAATCGTCTTGCCAGTAAGAGTCTTCACGAAGATCTGCAT 83659 >seq517 Length=118961 Score = 105 bits (116), Expect = 4e-18 Identities = 199/293 (68%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 6195 GACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAAC 6254 || || ||||| |||||||| ||| || || ||||| | || || || || || Sbjct 110377 GATGCTTTCTATCGCTACAAGATGGAACGGCTCCAGACCAAGATTGAAGGCAAAGGTAAT 110436 Query 6255 GGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCC 6314 || || || ||||| ||||||||| || |||||| || ||||| || |||| Sbjct 110437 GGCATCAAGACCGTTATTGTCAACCTGAGCAGCGTCGCTCAGTCGCTCTCCCGACCTGGT 110496 Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374 | || | | || || ||||| | ||| ||||||||||| || | |||||| Sbjct 110497 TCTTATCTTATCAAGTACTTCGGCTTCGAGCTTGGCGCTCAAACCAACATTGATCCTCCC 110556 Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434 |||| || | ||| | ||||| | || | | ||||||||||||| || ||| Sbjct 110557 GACGATCGATGGATCATCAACGGTGCCCACGAAGCCAGCAAGCTGCAGGACCATCTCGAC 110616 Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 || || ||| ||||||||| ||||| | ||||| | ||||| |||||||| Sbjct 110617 GGATTCATTTCCAAGTTTGTCCTGTGCAAGAAATGCAAGAACCCCGAGACCGA 110669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334943611773449