Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01- 04] 879 sequences; 40,986,545 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq802 228 1e-54 seq44 86.0 8e-12 >seq802 Length=124424 Score = 228 bits (252), Expect = 1e-54 Identities = 654/993 (66%), Gaps = 32/993 (3%) Strand=Plus/Minus Query 62639 GGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCC 62698 || || || || | ||| || || ||||||||||||| ||||| |||||| || || Sbjct 51326 GGGTAGTAGTTGACATCAATGATCTTATTGAGATTTCGGACAACGACTTTGGTTACTTCG 51267 Query 62699 TTCAGTTTGAGAAAATCAAA-TCGCCCATCTATTA-----CAAACATGTTCAATGCAACA 62752 | ||||| ||| || | |||||| | | || | ||| | ||| |||| Sbjct 51266 TGGAGTTTCTCAAAGTCGTACTCGCCCTTGTTGTAGTCGACGAACGAGGGCAAGGCAAGC 51207 Query 62753 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62812 ||||||| || || || || || || | | | | | ||| | || ||||| ||||| Sbjct 51206 GATGCCAAGTTGCAGACCGCCACTTCGTCCGGAGCTGAATACTCGATGATCTCGGTGCAG 51147 Query 62813 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 62872 ||||| | ||| || || | || | ||| || ||||| ||| || |||| Sbjct 51146 AGATTGGAGCTGCGGATAGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCC 51087 Query 62873 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 62932 |||||||| ||||| ||| | || ||||| |||| | || | || || | ||||| | Sbjct 51086 TTATAAAGCATGAAAGGATTTCCTGTTTCGGTCTGTGCCTCCAAGATGGCGTACCAGA-G 51028 Query 62933 ACTC-GAGCCTTTATTATAGATTTGTATCT----CTTTTCTCTTTCGTATAGTGTATACA 62987 || ||||||| | || ||| | | || || | ||||| | ||||| Sbjct 51027 CTTCTGAGCCTTGAG---AGTCTTGCGGCCGCGACCTTCCT-TCTCGTACTTTTCATACA 50972 Query 62988 ATCGTTCGAACTCGTCTCCCCAAA-CATT-GTCCAGTCCAGGACATTCATCCGGACACAT 63045 | || ||||| ||| ||| | || | | | || || || ||||| | || ||||| Sbjct 50971 AGGCCTCAAACTC--CTCACCATAGCAGTCGGCAAGGCCGGGGCATTCGTTAGGGCACAT 50914 Query 63046 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 63105 || | ||| || |||| | | ||||||||||| || ||||| || ||||| || || Sbjct 50913 CAGGGTCCAGTCGCCGTTCTTTTCAACTCGTTTCATGAAAAGATCGGGGATCCAGAGTGC 50854 Query 63106 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63165 | || | ||| | || || | || || || || |||||| |||||| | ||| Sbjct 50853 GAGGAACAAATCACGGGCTCGAATCTCTTCCTTGCCGTGATTCTTGCGAAGATCCAAGAA 50794 Query 63166 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63225 | | | | ||| | ||||| || || | ||| ||||| | |||| ||||| || || Sbjct 50793 CTCGAATACATCTGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCTCCCGGCCGCTTATT 50734 Query 63226 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63285 || || || || | ||| || || ||||| || | || | | ||| |||||||| || Sbjct 50733 GCCACCTTGGTCAACGTACCTGGCTGTGTTGTTGAAGACACGAAGCATGGGAATAATGCC 50674 Query 63286 ATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 63345 ||||| || || || ||||| | ||||| || |||||||||| | || Sbjct 50673 GTTGGACGTTCCGTTTGTCCCCGCAATATATGAGCCTGTGGCACGAATGCGATGGATGTT 50614 Query 63346 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 63405 || || || || || |||||||| ||||| | ||||||| || || || ||||| || Sbjct 50613 GAGGCCGATGCCACCGGCCATTTTTGAGATCATTGCGCATGTCTTCAATGTGTCATAAAT 50554 Query 63406 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 63465 ||||| ||||| |||||| |||||| | || || || |||| ||| | Sbjct 50553 TCCCTCAATACTGTCATCCTTCATGTCGACGAGGAAGCACGAGGACAACTGGGCTTGGGG 50494 Query 63466 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATT 63525 || || || ||||| | || || ||||| || || || |||| || | |||||| Sbjct 50493 TGTGCCGGCGTTAAAGAGAGTGGGTGAAGCATGGGTGAAGAATTTGGACGACATTAGATT 50434 Query 63526 GTACGTCTCAAT----AGCTGA--GTCTATATCCCATTGATGAATTCCTACTGCGACACG 63579 |||||||||||| ||| | ||| || ||| ||| || || |||||||| Sbjct 50433 GTACGTCTCAATCACACGCTCAACGTC-ATCGCCC-----CAAATACCAACAGCGACACG 50380 Query 63580 CATTAACATGTGCTGAGGTCTTTCAACGATCTT 63612 ||| | |||||||||||||| || || ||||| Sbjct 50379 CATGATCATGTGCTGAGGTCGCTCGACAATCTT 50347 >seq44 Length=30807 Score = 86.0 bits (94), Expect = 8e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || ||||| ||| || ||||||||||| | || | || ||||| || ||||| Sbjct 22470 CACGCGAAGTCGGTATGGAGACCCTCGTCACGGGAGATGAGCTCATTGGAGAAGGTGAGG 22529 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 || ||||| ||||||||||| || ||||| || ||||| || || | || ||||| Sbjct 22530 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAAGCACCGCTGAAGAAG 22589 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAA 32805 || ||||| || || |||||||||| Sbjct 22590 ATACCTTCGACGGCGGCAAAGGCAA 22614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633625037968400