Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01-
04] 879 sequences; 40,986,545 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq802 228 1e-54
seq44 86.0 8e-12
>seq802
Length=124424
Score = 228 bits (252), Expect = 1e-54
Identities = 654/993 (66%), Gaps = 32/993 (3%)
Strand=Plus/Minus
Query 62639 GGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCC 62698
|| || || || | ||| || || ||||||||||||| ||||| |||||| || ||
Sbjct 51326 GGGTAGTAGTTGACATCAATGATCTTATTGAGATTTCGGACAACGACTTTGGTTACTTCG 51267
Query 62699 TTCAGTTTGAGAAAATCAAA-TCGCCCATCTATTA-----CAAACATGTTCAATGCAACA 62752
| ||||| ||| || | |||||| | | || | ||| | ||| ||||
Sbjct 51266 TGGAGTTTCTCAAAGTCGTACTCGCCCTTGTTGTAGTCGACGAACGAGGGCAAGGCAAGC 51207
Query 62753 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62812
||||||| || || || || || || | | | | | ||| | || ||||| |||||
Sbjct 51206 GATGCCAAGTTGCAGACCGCCACTTCGTCCGGAGCTGAATACTCGATGATCTCGGTGCAG 51147
Query 62813 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 62872
||||| | ||| || || | || | ||| || ||||| ||| || ||||
Sbjct 51146 AGATTGGAGCTGCGGATAGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCC 51087
Query 62873 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 62932
|||||||| ||||| ||| | || ||||| |||| | || | || || | ||||| |
Sbjct 51086 TTATAAAGCATGAAAGGATTTCCTGTTTCGGTCTGTGCCTCCAAGATGGCGTACCAGA-G 51028
Query 62933 ACTC-GAGCCTTTATTATAGATTTGTATCT----CTTTTCTCTTTCGTATAGTGTATACA 62987
|| ||||||| | || ||| | | || || | ||||| | |||||
Sbjct 51027 CTTCTGAGCCTTGAG---AGTCTTGCGGCCGCGACCTTCCT-TCTCGTACTTTTCATACA 50972
Query 62988 ATCGTTCGAACTCGTCTCCCCAAA-CATT-GTCCAGTCCAGGACATTCATCCGGACACAT 63045
| || ||||| ||| ||| | || | | | || || || ||||| | || |||||
Sbjct 50971 AGGCCTCAAACTC--CTCACCATAGCAGTCGGCAAGGCCGGGGCATTCGTTAGGGCACAT 50914
Query 63046 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 63105
|| | ||| || |||| | | ||||||||||| || ||||| || ||||| || ||
Sbjct 50913 CAGGGTCCAGTCGCCGTTCTTTTCAACTCGTTTCATGAAAAGATCGGGGATCCAGAGTGC 50854
Query 63106 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63165
| || | ||| | || || | || || || || |||||| |||||| | |||
Sbjct 50853 GAGGAACAAATCACGGGCTCGAATCTCTTCCTTGCCGTGATTCTTGCGAAGATCCAAGAA 50794
Query 63166 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63225
| | | | ||| | ||||| || || | ||| ||||| | |||| ||||| || ||
Sbjct 50793 CTCGAATACATCTGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCTCCCGGCCGCTTATT 50734
Query 63226 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63285
|| || || || | ||| || || ||||| || | || | | ||| |||||||| ||
Sbjct 50733 GCCACCTTGGTCAACGTACCTGGCTGTGTTGTTGAAGACACGAAGCATGGGAATAATGCC 50674
Query 63286 ATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 63345
||||| || || || ||||| | ||||| || |||||||||| | ||
Sbjct 50673 GTTGGACGTTCCGTTTGTCCCCGCAATATATGAGCCTGTGGCACGAATGCGATGGATGTT 50614
Query 63346 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 63405
|| || || || || |||||||| ||||| | ||||||| || || || ||||| ||
Sbjct 50613 GAGGCCGATGCCACCGGCCATTTTTGAGATCATTGCGCATGTCTTCAATGTGTCATAAAT 50554
Query 63406 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 63465
||||| ||||| |||||| |||||| | || || || |||| ||| |
Sbjct 50553 TCCCTCAATACTGTCATCCTTCATGTCGACGAGGAAGCACGAGGACAACTGGGCTTGGGG 50494
Query 63466 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATT 63525
|| || || ||||| | || || ||||| || || || |||| || | ||||||
Sbjct 50493 TGTGCCGGCGTTAAAGAGAGTGGGTGAAGCATGGGTGAAGAATTTGGACGACATTAGATT 50434
Query 63526 GTACGTCTCAAT----AGCTGA--GTCTATATCCCATTGATGAATTCCTACTGCGACACG 63579
|||||||||||| ||| | ||| || ||| ||| || || ||||||||
Sbjct 50433 GTACGTCTCAATCACACGCTCAACGTC-ATCGCCC-----CAAATACCAACAGCGACACG 50380
Query 63580 CATTAACATGTGCTGAGGTCTTTCAACGATCTT 63612
||| | |||||||||||||| || || |||||
Sbjct 50379 CATGATCATGTGCTGAGGTCGCTCGACAATCTT 50347
>seq44
Length=30807
Score = 86.0 bits (94), Expect = 8e-12
Identities = 106/145 (73%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720
|| ||||| ||| || ||||||||||| | || | || ||||| || |||||
Sbjct 22470 CACGCGAAGTCGGTATGGAGACCCTCGTCACGGGAGATGAGCTCATTGGAGAAGGTGAGG 22529
Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780
|| ||||| ||||||||||| || ||||| || ||||| || || | || |||||
Sbjct 22530 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAAGCACCGCTGAAGAAG 22589
Query 32781 ATTCCTTCTACTGCCGCAAAGGCAA 32805
|| ||||| || || ||||||||||
Sbjct 22590 ATACCTTCGACGGCGGCAAAGGCAA 22614
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633625037968400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |