Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01- 04] 879 sequences; 40,986,545 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq794 114 1e-20 seq404 86.0 5e-12 seq754 84.2 2e-11 >seq794 Length=142894 Score = 114 bits (126), Expect = 1e-20 Identities = 150/203 (74%), Gaps = 6/203 (3%) Strand=Plus/Plus Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070 || |||||| | ||||| || ||||||| |||| || |||||||| ||||| ||||| Sbjct 83443 GTCAAGACTCTTACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCCGACACCATCGA- 83501 Query 25071 TCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATT 25127 || || ||| | || | ||| ||||| || || ||||| ||||||||||| || | Sbjct 83502 -CAATGTCAAGTCGAAGATTCAG-GACAAGGAGGGTATTCCTCCTGACCAACAACGATTG 83559 Query 25128 ATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAA 25187 ||||| |||||||| || | || |||| ||||| | ||| |||||||| || || Sbjct 83560 ATTTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAATATCCAGAAG 83619 Query 25188 GAATCCACGCTACATTTAGTGCT 25210 || |||||||| ||| | || || Sbjct 83620 GAGTCCACGCTCCATCTGGTCCT 83642 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | ||||| || | || || ||||||| ||||| || Sbjct 83887 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAGACTATTACGCTCGAAGTTGAGTCTTCG 83946 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || ||||| ||||| | || | ||| ||||| || || ||||| || || || Sbjct 83947 GATACCATCGACAATGTGAAGTCGAAGATTCAG-GACAAGGAGGGAATTCCCCCCGATCA 84005 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | ||||| |||||||| || | || || | || ||| | |||||||| Sbjct 84006 GCAGCGTCTCATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGTACTCTTTCTGATTACAA 84065 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| || || || |||||||| ||| | || || Sbjct 84066 TATCCAGAAGGAGTCCACGCTCCATCTCGTCCT 84098 Score = 87.8 bits (96), Expect = 2e-12 Identities = 129/181 (71%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 25023 ACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTG--AAGC 25080 ||||| || ||||||| |||| || ||||| ||||| || ||||| || || ||| Sbjct 83146 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGATACCATCGA--CAATGTCAAGT 83203 Query 25081 AAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCA 25140 || ||| ||||| || || ||||| || ||||| ||||| | ||||| || |||| Sbjct 83204 CGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGCCTGATTTTCGCTGGCA 83263 Query 25141 AACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTAC 25200 | || | || || | || || | |||||||||||||| || |||||||| || | Sbjct 83264 AGCAGCTTGAGGACGGCCGAACCCTTTCTGATTACAATATTCAGAAGGAATCCACCCTTC 83323 Query 25201 A 25201 | Sbjct 83324 A 83324 >seq404 Length=95643 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| | || || || ||||||| | || || ||||| || Sbjct 37470 ATGCAAATCTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCG 37411 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| || || ||| || ||| ||||| || || || || || |||| Sbjct 37410 GACACGATCGA--CAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACC 37353 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| | || || |||||||| || | || || | ||||| | ||| |||| Sbjct 37352 AACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACA 37293 Query 25177 ATATTCAAAAAGAATCCACGCTACA 25201 | || || || || ||||| || || Sbjct 37292 ACATCCAGAAGGAGTCCACCCTCCA 37268 >seq754 Length=106820 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 ||||| ||||| | || ||||| ||||||| | || || ||||| || ||||| ||| Sbjct 63584 TTTGTCAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGATC 63525 Query 25068 GAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATT 25127 || ||||| || ||| ||||| || || || || || || |||||||| || Sbjct 63524 GACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGATCAACAGCGTCTT 63465 Query 25128 ATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186 || || ||||| || || | || |||| ||||| | |||||||||||||| || Sbjct 63464 ATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGATTACAATATTCAGAA 63406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433323357838385