Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01- 04] 879 sequences; 40,986,545 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq794 136 3e-27 seq404 125 6e-24 seq802 123 2e-23 seq754 113 4e-20 >seq794 Length=142894 Score = 136 bits (150), Expect = 3e-27 Identities = 149/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | || || || ||| | || || ||||| ||| | | Sbjct 83659 ATGCAGATCTTCGTGAAGACTCTTACTGGCAAGACGATTACCCTCGAAGTTGAATCATCG 83718 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| || ||||| || |||||||| || || ||||||||| Sbjct 83719 GATACCATCGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGCATCCCTCCCGATCAA 83778 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || ||||| || || ||| | || ||| ||||||| |||| ||||||||| Sbjct 83779 CAACGTCTCATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACCCTCTCTGATTACAAC 83838 Query 22399 ATTCAAAAAGAATCCACC 22416 ||||| || || |||||| Sbjct 83839 ATTCAGAAGGAGTCCACC 83856 Score = 122 bits (134), Expect = 7e-23 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 22231 GTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGAC 22290 || || ||| | ||||| || || |||| || || || || | |||| ||| | ||| Sbjct 83443 GTCAAGACTCTTACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCCGACACCATCGAC 83502 Query 22291 GATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATA 22350 || |||| || ||||| ||||||||||||||||| || || |||||||| | || Sbjct 83503 AATGTCAAGTCGAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCAACAACGATTGATT 83562 Query 22351 TTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAA 22410 || |||||||| ||| | |||||| ||||||| ||||||| ||||| || || || || Sbjct 83563 TTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAATATCCAGAAGGAG 83622 Query 22411 TCCAC 22415 ||||| Sbjct 83623 TCCAC 83627 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | ||||| || || | || || ||||| || | | Sbjct 83887 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAGACTATTACGCTCGAAGTTGAGTCTTCG 83946 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| || | || || ||||| ||||||||||| ||||| |||||||| Sbjct 83947 GATACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGAATTCCCCCCGATCAG 84006 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||| | ||||| ||| || | || |||||||| Sbjct 84007 CAGCGTCTCATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGTACTCTTTCTGATTACAAT 84066 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 84067 ATCCAGAAGGAGTCCAC 84083 Score = 107 bits (118), Expect = 2e-18 Identities = 128/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| || || || || || | |||||| | ||| || |||| Sbjct 83146 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGATACCATCGACAATGTCAAGTCG 83205 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| ||||| || || || || || || || ||||| Sbjct 83206 AAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGCCTGATTTTCGCTGGCAAG 83265 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| | ||||| ||| ||| | || |||||||| ||||| || ||||||||| Sbjct 83266 CAGCTTGAGGACGGCCGAACCCTTTCTGATTACAATATTCAGAAGGAATCCACC 83319 >seq404 Length=95643 Score = 125 bits (138), Expect = 6e-24 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| |||||||| || || || || |||| || || || |||| ||||| || || | Sbjct 37474 AAACATGCAAATCTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAGTC 37415 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | | || || | ||| || |||| || || || ||||||||||| || || ||||| Sbjct 37414 CTCGGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 37355 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 ||||| || || || || |||||||| ||| | ||||| ||||||| ||||||| || Sbjct 37354 CCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTA 37295 Query 22395 CAACATTCAAAAAGAATCCACC 22416 |||||| || || || |||||| Sbjct 37294 CAACATCCAGAAGGAGTCCACC 37273 >seq802 Length=124424 Score = 123 bits (136), Expect = 2e-23 Identities = 318/477 (67%), Gaps = 17/477 (4%) Strand=Plus/Minus Query 130014 TTCGACTCGTTTCATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTCGCGCT-- 130071 ||| ||||||||||| || | |||||| | ||| || ||| |||||||| || ||| Sbjct 50892 TTCAACTCGTTTCATGAAAAGATCGGGGATCCAGAGTGCGAGGAACAAATCACGGGCTCG 50833 Query 130072 --TTTCTATCCTCGGCACCCATGTTACGTTTC--AGTTCAAGGAAATCGTAAATGTCGGC 130127 | ||| |||| | || || | | || | || || | ||| ||| | | || || Sbjct 50832 AATCTCT-TCCTTG----CCGTGATTC-TTGCGAAGATCCAAGAACTCGAATACATCTGC 50779 Query 130128 GTGCCACGGTTCAACATAAATTGCCATTGCGCCCTTCCGTTT---GCCCCCTTGGTCAAC 130184 |||||| || |||| || || || | || ||| ||| || ||| ||||||||||| Sbjct 50778 GTGCCATGGCTCAAGGTAGATGGCAAAGGCTCCCGGCCGCTTATTGCCACCTTGGTCAAC 50719 Query 130185 GTGGCGCACGGCATTGTTGTAGACTCGCAACATTGCCTCCAATCCGTTGGCCGTGCCGTT 130244 || | | | |||||| |||| || | ||| | | ||||||| ||| ||||| Sbjct 50718 GTACCTGGCTGTGTTGTTGAAGACACGAAGCATGGGAATAATGCCGTTGGACGTTCCGTT 50659 Query 130245 TGTGCTCTCAATGAAACTGCCACGAGCCCGAACGTTATGAACGCTTAGACCTATGCCGCC 130304 ||| | | |||| | ||| || |||| | ||| | | | || || ||||| || Sbjct 50658 TGTCCCCGCAATATATGAGCCTGTGGCACGAATGCGATGGATGTTGAGGCCGATGCCACC 50599 Query 130305 GCCAAATTTTGATATCAACGCGCAATCGCGT-AGCGTTTCATAAATGCCAACGATACTGT 130363 | | | |||||| |||| |||| || | | | || |||||||| || | ||||||| Sbjct 50598 GGCCATTTTTGAGATCATTGCGC-ATGTCTTCAATGTGTCATAAATTCCCTCAATACTGT 50540 Query 130364 CTTCTTTAATGTTTAGGAGGAAACACGAGGCCAATTGGGCGTAACATGATCCGCTGGCAA 130423 | || || |||| | |||||| ||||||| ||| ||||| | || ||| | || Sbjct 50539 CATCCTTCATGTCGACGAGGAAGCACGAGGACAACTGGGCTTGGGGTGTGCCGGCGTTAA 50480 Query 130424 ACAAAGTTGGACTTGCATGTGTATACATTTTGTGTGCCATCAAATTGTACGTTTCAA 130480 | | ||| || ||||| || | | |||| | ||| | ||||||||| |||| Sbjct 50479 AGAGAGTGGGTGAAGCATGGGTGAAGAATTTGGACGACATTAGATTGTACGTCTCAA 50423 >seq754 Length=106820 Score = 113 bits (124), Expect = 4e-20 Identities = 133/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 |||||| || || | || ||||| || |||| ||||| || || || | || || | Sbjct 63585 TTTTGTCAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGAT 63526 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| || | || || || || ||||||||||| || || ||||||||||| ||||| Sbjct 63525 CGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGATCAACAGCGTCT 63466 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 ||| || ||||| || ||| | |||||| ||||||| | || |||||||| ||||| || Sbjct 63465 TATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGATTACAATATTCAGAA 63406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419723503532635