Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01-
04] 879 sequences; 40,986,545 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq794 136 3e-27
seq404 125 6e-24
seq802 123 2e-23
seq754 113 4e-20
>seq794
Length=142894
Score = 136 bits (150), Expect = 3e-27
Identities = 149/198 (75%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || ||| | || || || ||| | || || ||||| ||| | |
Sbjct 83659 ATGCAGATCTTCGTGAAGACTCTTACTGGCAAGACGATTACCCTCGAAGTTGAATCATCG 83718
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| | |||| || ||||| || |||||||| || || |||||||||
Sbjct 83719 GATACCATCGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGCATCCCTCCCGATCAA 83778
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||||| || ||||| || || ||| | || ||| ||||||| |||| |||||||||
Sbjct 83779 CAACGTCTCATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACCCTCTCTGATTACAAC 83838
Query 22399 ATTCAAAAAGAATCCACC 22416
||||| || || ||||||
Sbjct 83839 ATTCAGAAGGAGTCCACC 83856
Score = 122 bits (134), Expect = 7e-23
Identities = 138/185 (75%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 22231 GTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGAC 22290
|| || ||| | ||||| || || |||| || || || || | |||| ||| | |||
Sbjct 83443 GTCAAGACTCTTACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCCGACACCATCGAC 83502
Query 22291 GATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATA 22350
|| |||| || ||||| ||||||||||||||||| || || |||||||| | ||
Sbjct 83503 AATGTCAAGTCGAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCAACAACGATTGATT 83562
Query 22351 TTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAA 22410
|| |||||||| ||| | |||||| ||||||| ||||||| ||||| || || || ||
Sbjct 83563 TTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAATATCCAGAAGGAG 83622
Query 22411 TCCAC 22415
|||||
Sbjct 83623 TCCAC 83627
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || | ||||| || || | || || ||||| || | |
Sbjct 83887 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAGACTATTACGCTCGAAGTTGAGTCTTCG 83946
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| || | || || ||||| ||||||||||| ||||| ||||||||
Sbjct 83947 GATACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGAATTCCCCCCGATCAG 84006
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || |||||||| ||| | ||||| ||| || | || ||||||||
Sbjct 84007 CAGCGTCTCATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGTACTCTTTCTGATTACAAT 84066
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || || || |||||
Sbjct 84067 ATCCAGAAGGAGTCCAC 84083
Score = 107 bits (118), Expect = 2e-18
Identities = 128/174 (74%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
||||| || || |||| || || || || || | |||||| | ||| || ||||
Sbjct 83146 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGATACCATCGACAATGTCAAGTCG 83205
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || ||||||||||| ||||| ||||| || || || || || || || |||||
Sbjct 83206 AAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGCCTGATTTTCGCTGGCAAG 83265
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416
||| | ||||| ||| ||| | || |||||||| ||||| || |||||||||
Sbjct 83266 CAGCTTGAGGACGGCCGAACCCTTTCTGATTACAATATTCAGAAGGAATCCACC 83319
>seq404
Length=95643
Score = 125 bits (138), Expect = 6e-24
Identities = 149/202 (74%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274
||| |||||||| || || || || |||| || || || |||| ||||| || || |
Sbjct 37474 AAACATGCAAATCTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAGTC 37415
Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334
| | || || | ||| || |||| || || || ||||||||||| || || |||||
Sbjct 37414 CTCGGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 37355
Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394
||||| || || || || |||||||| ||| | ||||| ||||||| ||||||| ||
Sbjct 37354 CCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTA 37295
Query 22395 CAACATTCAAAAAGAATCCACC 22416
|||||| || || || ||||||
Sbjct 37294 CAACATCCAGAAGGAGTCCACC 37273
>seq802
Length=124424
Score = 123 bits (136), Expect = 2e-23
Identities = 318/477 (67%), Gaps = 17/477 (4%)
Strand=Plus/Minus
Query 130014 TTCGACTCGTTTCATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTCGCGCT-- 130071
||| ||||||||||| || | |||||| | ||| || ||| |||||||| || |||
Sbjct 50892 TTCAACTCGTTTCATGAAAAGATCGGGGATCCAGAGTGCGAGGAACAAATCACGGGCTCG 50833
Query 130072 --TTTCTATCCTCGGCACCCATGTTACGTTTC--AGTTCAAGGAAATCGTAAATGTCGGC 130127
| ||| |||| | || || | | || | || || | ||| ||| | | || ||
Sbjct 50832 AATCTCT-TCCTTG----CCGTGATTC-TTGCGAAGATCCAAGAACTCGAATACATCTGC 50779
Query 130128 GTGCCACGGTTCAACATAAATTGCCATTGCGCCCTTCCGTTT---GCCCCCTTGGTCAAC 130184
|||||| || |||| || || || | || ||| ||| || ||| |||||||||||
Sbjct 50778 GTGCCATGGCTCAAGGTAGATGGCAAAGGCTCCCGGCCGCTTATTGCCACCTTGGTCAAC 50719
Query 130185 GTGGCGCACGGCATTGTTGTAGACTCGCAACATTGCCTCCAATCCGTTGGCCGTGCCGTT 130244
|| | | | |||||| |||| || | ||| | | ||||||| ||| |||||
Sbjct 50718 GTACCTGGCTGTGTTGTTGAAGACACGAAGCATGGGAATAATGCCGTTGGACGTTCCGTT 50659
Query 130245 TGTGCTCTCAATGAAACTGCCACGAGCCCGAACGTTATGAACGCTTAGACCTATGCCGCC 130304
||| | | |||| | ||| || |||| | ||| | | | || || ||||| ||
Sbjct 50658 TGTCCCCGCAATATATGAGCCTGTGGCACGAATGCGATGGATGTTGAGGCCGATGCCACC 50599
Query 130305 GCCAAATTTTGATATCAACGCGCAATCGCGT-AGCGTTTCATAAATGCCAACGATACTGT 130363
| | | |||||| |||| |||| || | | | || |||||||| || | |||||||
Sbjct 50598 GGCCATTTTTGAGATCATTGCGC-ATGTCTTCAATGTGTCATAAATTCCCTCAATACTGT 50540
Query 130364 CTTCTTTAATGTTTAGGAGGAAACACGAGGCCAATTGGGCGTAACATGATCCGCTGGCAA 130423
| || || |||| | |||||| ||||||| ||| ||||| | || ||| | ||
Sbjct 50539 CATCCTTCATGTCGACGAGGAAGCACGAGGACAACTGGGCTTGGGGTGTGCCGGCGTTAA 50480
Query 130424 ACAAAGTTGGACTTGCATGTGTATACATTTTGTGTGCCATCAAATTGTACGTTTCAA 130480
| | ||| || ||||| || | | |||| | ||| | ||||||||| ||||
Sbjct 50479 AGAGAGTGGGTGAAGCATGGGTGAAGAATTTGGACGACATTAGATTGTACGTCTCAA 50423
>seq754
Length=106820
Score = 113 bits (124), Expect = 4e-20
Identities = 133/180 (74%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
|||||| || || | || ||||| || |||| ||||| || || || | || || |
Sbjct 63585 TTTTGTCAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGAT 63526
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| || | || || || || ||||||||||| || || ||||||||||| |||||
Sbjct 63525 CGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGATCAACAGCGTCT 63466
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
||| || ||||| || ||| | |||||| ||||||| | || |||||||| ||||| ||
Sbjct 63465 TATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGATTACAATATTCAGAA 63406
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419723503532635
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |