Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01- 04] 879 sequences; 40,986,545 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq746 107 4e-18 seq488 98.7 2e-15 seq802 86.0 1e-11 >seq746 Length=76344 Score = 107 bits (118), Expect = 4e-18 Identities = 177/250 (71%), Gaps = 4/250 (2%) Strand=Plus/Plus Query 279318 GACGAAGCAGAGAAGGA-GACTGAGCCAGGTGAGGATCTGTGTGACTGTGATTTCTCGCT 279376 || || || ||| |||| ||| ||| || ||||| || || |||| ||||| || Sbjct 56307 GATGAGGCTGAGGAGGATGAC-GAGGAGGGCGAGGACCTCTGCAACTGCACCTTCTCTCT 56365 Query 279377 CGCATATGGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGTGGCAACCG 279436 ||| || |||| |||||||| || ||| || | ||| | ||||||||||| | || Sbjct 56366 CGCCTACGGTGCCAAGATTCTTCTCAACCAGACTGGTCTCCGCCTCAAGCGTGGCCAGCG 56425 Query 279437 GTATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCCATTGCAAA 279496 ||||||||| ||||||||| || | || ||| ||||| ||||| ||||| || Sbjct 56426 CTATGGTCTCTGCGGTCCCAACGGTTCCGGCAAGTCTACTCTCATGCGTGCCATCAACAA 56485 Query 279497 CGGTCAGCTGGAAGGATTTCCTAACGCA-TCTGAGGTAAGGACAGTGTATGTAGAGCACG 279555 || ||| | || || || || || ||| || ||||| | ||| || | || ||||||| Sbjct 56486 CGAGCAGGTCGAGGGCTTCCCCAA-GCAGTCCGAGGTCAAGACCGTCTTCGTCGAGCACG 56544 Query 279556 ACATCGACTC 279565 || | ||||| Sbjct 56545 ACTTGGACTC 56554 Score = 87.8 bits (96), Expect = 4e-12 Identities = 93/120 (78%), Gaps = 2/120 (2%) Strand=Plus/Plus Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762 ||||| ||||| |||||||| || || || ||| ||||| | ||| ||| || || Sbjct 57738 CACTCGCGCATGCGCGGTCTCTCCGGCGGTCAGCGTGTCAAGGTCGTCCTCGCGGCCTGC 57797 Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 || |||||| | || ||| ||||||||||||| ||||| ||||||||||| || ||||| Sbjct 57798 TC-GTGGCAGCGACCCCACTTGATCGTTCTCGATGAGCCCACCAACTATCTCGATCGCGA 57856 >seq488 Length=166229 Score = 98.7 bits (108), Expect = 2e-15 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 280146 CAGGTTTCTATGAACTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACC 280205 ||| |||| || ||| || ||| |||| || || || |||||||| ||||| ||| Sbjct 34222 CAGCTTTCGCTGTCCTCCCGAGTTGCCATCATCGGTCCTAACGGTGCGGGCAAGTCCACC 34163 Query 280206 CTAATCAAAGTCCTGACTGGCGAGACCCAGGCCACTGAGGGGTC-CGTTTGGAAGCATCC 280264 | ||||| |||| || ||||| || || || || || | ||| ||||||||| Sbjct 34162 ATGATCAAGCTCCTCACCGGCGA-ACTCATCCCCACGATCGGCCGCGTCGAGAAGCATCC 34104 Query 280265 CAACATGCGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGA 280324 |||| |||| || | ||| || ||||| ||||| | ||| |||||| || |||| Sbjct 34103 CAACTTGCGTATCGGCTACATCAAGCAGCATGCTTTGGAGCACGTCGAGATGCATTTGGA 34044 Query 280325 CATGACTCCTAACCAATACATTCAGTGGCGCTATGC 280360 | ||| || ||||| ||| |||| ||||| ||||| Sbjct 34043 GAAGACGCCGAACCAGTACCTTCAATGGCGATATGC 34008 >seq802 Length=124424 Score = 86.0 bits (94), Expect = 1e-11 Identities = 179/267 (67%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 293115 CTGCGTCTGATCGACAAAGGCACCACGATCAGCAGCGAGGTCAATCACTGTCTTCATAGA 293174 ||||| |||||| | |||||||||||||| || || | | | || || | || Sbjct 51984 CTGCGACTGATCAATGAAGGCACCACGATCGGCGGCCATCTGGACAACGGTGCGCTGGGA 51925 Query 293175 GATCTCCCACGATGTCTTGTACACTGCCTTGACATCAGGATGAATGCCAATAACCTTCTG 293234 ||| ||||| |||||||| | || |||| ||| |||||| | ||||| Sbjct 51924 GATTTCCCAGACGGTCTTGTAGAGGGCTTTGATATCCTCGGGAATGCTTGGGATATTCTG 51865 Query 293235 GATAGACCCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACCAAGTCCCACGAGC 293294 ||||| || || | ||| || || |||||||||| | || |||||| ||| | | Sbjct 51864 AATAGAGCCACCTTCGGCGATGATGCGGTTCTTCATAGAGTCCGACCAAAGGCCAAGGTC 51805 Query 293295 AATGAGCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCGACG 293354 || || || |||| ||| ||| |||||| || |||| || || || | || || Sbjct 51804 AACAAGATCCCGGAGAAGCCAAGGGTTGACGACCTGGAATTCGCCGGCCAAGACACGTCG 51745 Query 293355 GCTGTAAATGTTCGAAGTGATGGGTTC 293381 |||||||||||| ||| |||||| Sbjct 51744 TTGGTAAATGTTCGAGGTGTAGGGTTC 51718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027825224309239