Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01-
04] 879 sequences; 40,986,545 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq746 107 4e-18
seq488 98.7 2e-15
seq802 86.0 1e-11
>seq746
Length=76344
Score = 107 bits (118), Expect = 4e-18
Identities = 177/250 (71%), Gaps = 4/250 (2%)
Strand=Plus/Plus
Query 279318 GACGAAGCAGAGAAGGA-GACTGAGCCAGGTGAGGATCTGTGTGACTGTGATTTCTCGCT 279376
|| || || ||| |||| ||| ||| || ||||| || || |||| ||||| ||
Sbjct 56307 GATGAGGCTGAGGAGGATGAC-GAGGAGGGCGAGGACCTCTGCAACTGCACCTTCTCTCT 56365
Query 279377 CGCATATGGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGTGGCAACCG 279436
||| || |||| |||||||| || ||| || | ||| | ||||||||||| | ||
Sbjct 56366 CGCCTACGGTGCCAAGATTCTTCTCAACCAGACTGGTCTCCGCCTCAAGCGTGGCCAGCG 56425
Query 279437 GTATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCCATTGCAAA 279496
||||||||| ||||||||| || | || ||| ||||| ||||| ||||| ||
Sbjct 56426 CTATGGTCTCTGCGGTCCCAACGGTTCCGGCAAGTCTACTCTCATGCGTGCCATCAACAA 56485
Query 279497 CGGTCAGCTGGAAGGATTTCCTAACGCA-TCTGAGGTAAGGACAGTGTATGTAGAGCACG 279555
|| ||| | || || || || || ||| || ||||| | ||| || | || |||||||
Sbjct 56486 CGAGCAGGTCGAGGGCTTCCCCAA-GCAGTCCGAGGTCAAGACCGTCTTCGTCGAGCACG 56544
Query 279556 ACATCGACTC 279565
|| | |||||
Sbjct 56545 ACTTGGACTC 56554
Score = 87.8 bits (96), Expect = 4e-12
Identities = 93/120 (78%), Gaps = 2/120 (2%)
Strand=Plus/Plus
Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762
||||| ||||| |||||||| || || || ||| ||||| | ||| ||| || ||
Sbjct 57738 CACTCGCGCATGCGCGGTCTCTCCGGCGGTCAGCGTGTCAAGGTCGTCCTCGCGGCCTGC 57797
Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822
|| |||||| | || ||| ||||||||||||| ||||| ||||||||||| || |||||
Sbjct 57798 TC-GTGGCAGCGACCCCACTTGATCGTTCTCGATGAGCCCACCAACTATCTCGATCGCGA 57856
>seq488
Length=166229
Score = 98.7 bits (108), Expect = 2e-15
Identities = 153/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 280146 CAGGTTTCTATGAACTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACC 280205
||| |||| || ||| || ||| |||| || || || |||||||| ||||| |||
Sbjct 34222 CAGCTTTCGCTGTCCTCCCGAGTTGCCATCATCGGTCCTAACGGTGCGGGCAAGTCCACC 34163
Query 280206 CTAATCAAAGTCCTGACTGGCGAGACCCAGGCCACTGAGGGGTC-CGTTTGGAAGCATCC 280264
| ||||| |||| || ||||| || || || || || | ||| |||||||||
Sbjct 34162 ATGATCAAGCTCCTCACCGGCGA-ACTCATCCCCACGATCGGCCGCGTCGAGAAGCATCC 34104
Query 280265 CAACATGCGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGA 280324
|||| |||| || | ||| || ||||| ||||| | ||| |||||| || ||||
Sbjct 34103 CAACTTGCGTATCGGCTACATCAAGCAGCATGCTTTGGAGCACGTCGAGATGCATTTGGA 34044
Query 280325 CATGACTCCTAACCAATACATTCAGTGGCGCTATGC 280360
| ||| || ||||| ||| |||| ||||| |||||
Sbjct 34043 GAAGACGCCGAACCAGTACCTTCAATGGCGATATGC 34008
>seq802
Length=124424
Score = 86.0 bits (94), Expect = 1e-11
Identities = 179/267 (67%), Gaps = 0/267 (0%)
Strand=Plus/Minus
Query 293115 CTGCGTCTGATCGACAAAGGCACCACGATCAGCAGCGAGGTCAATCACTGTCTTCATAGA 293174
||||| |||||| | |||||||||||||| || || | | | || || | ||
Sbjct 51984 CTGCGACTGATCAATGAAGGCACCACGATCGGCGGCCATCTGGACAACGGTGCGCTGGGA 51925
Query 293175 GATCTCCCACGATGTCTTGTACACTGCCTTGACATCAGGATGAATGCCAATAACCTTCTG 293234
||| ||||| |||||||| | || |||| ||| |||||| | |||||
Sbjct 51924 GATTTCCCAGACGGTCTTGTAGAGGGCTTTGATATCCTCGGGAATGCTTGGGATATTCTG 51865
Query 293235 GATAGACCCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACCAAGTCCCACGAGC 293294
||||| || || | ||| || || |||||||||| | || |||||| ||| | |
Sbjct 51864 AATAGAGCCACCTTCGGCGATGATGCGGTTCTTCATAGAGTCCGACCAAAGGCCAAGGTC 51805
Query 293295 AATGAGCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCGACG 293354
|| || || |||| ||| ||| |||||| || |||| || || || | || ||
Sbjct 51804 AACAAGATCCCGGAGAAGCCAAGGGTTGACGACCTGGAATTCGCCGGCCAAGACACGTCG 51745
Query 293355 GCTGTAAATGTTCGAAGTGATGGGTTC 293381
|||||||||||| ||| ||||||
Sbjct 51744 TTGGTAAATGTTCGAGGTGTAGGGTTC 51718
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027825224309239
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |