Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01-
04] 879 sequences; 40,986,545 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq794 129 1e-24
seq404 113 1e-19
seq754 93.3 1e-13
seq44 86.0 1e-11
>seq794
Length=142894
Score = 129 bits (142), Expect = 1e-24
Identities = 169/233 (73%), Gaps = 6/233 (3%)
Strand=Plus/Minus
Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303
|| ||||| || || | || |||||||| | |||| || || |||||||| || ||
Sbjct 84116 TGGCCACCACGAAGGCGGAGGACGAGATGGAGCGTGGACTCCTTCTGGATATTGTAATCA 84057
Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363
| || || || ||||| || | || || || ||||| || |||||||| ||| ||
Sbjct 84056 GAAAGAGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGA---TCG 84000
Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420
||| ||||| || || ||||| || |||| ||||| || || || | ||| ||
Sbjct 83999 GGGGGAATTCCCTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCCGAAGAC 83940
Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||||||||| || ||||| ||||| || |||||||| || ||||||||
Sbjct 83939 TCAACTTCGAGCGTAATAGTCTTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 83887
Score = 122 bits (134), Expect = 2e-22
Identities = 157/217 (72%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || ||||| | |||| || || |||||||| ||||||| |
Sbjct 83657 CCACCACGGAGACGGAGGACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCGGAG 83598
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || || || | || || || ||||| |||| || ||||| | ||
Sbjct 83597 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGA 83538
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || ||||| || |||| || || || || || | ||| ||| || ||
Sbjct 83537 ATACCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCAACC 83478
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463
||||| ||||| ||||| ||||| |||||||||||||
Sbjct 83477 TCGAGGGTGATGGTCTTGCCGGTAAGAGTCTTGACGA 83441
>seq404
Length=95643
Score = 113 bits (124), Expect = 1e-19
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || ||||| || | ||| || || ||||| || ||||||| |
Sbjct 37244 CCACCACGAAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 37303
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| ||||| || | || || || ||||||||||| |||||||| |||
Sbjct 37304 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGG 37363
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || |||||||| || | || || || || || | || || || ||
Sbjct 37364 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACC 37423
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| ||||| || || || ||||||||||| || |||||
Sbjct 37424 TCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACGAAGATTTGCAT 37470
>seq754
Length=106820
Score = 93.3 bits (102), Expect = 1e-13
Identities = 128/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| || ||||| || || | || ||||| || || || | || ||||| ||||||||
Sbjct 63406 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATA 63465
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405
|||||||||||| |||||||| || || |||||||| || | ||||| || ||
Sbjct 63466 AGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCG 63525
Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| | || || || || || || ||||| ||||| || || || |||||||| ||
Sbjct 63526 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACAAA 63584
>seq44
Length=30807
Score = 86.0 bits (94), Expect = 1e-11
Identities = 131/187 (70%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 269138 TCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGG 269197
|||| ||| | || |||| ||||| || | |||||||| || || || || ||||| |
Sbjct 22368 TCCCCTGTGCCCTGCTCGGCATGAACGCGAACCTCATGAAGCAGTACATTGAGTTCGTCG 22309
Query 269198 CTGATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCG 269257
| || | | || || ||||| | ||||| | |||| || | || |||||||
Sbjct 22308 CCGACAGGCTGCTCGTCGCCCTCGGCAACGAGAAGATCTACAGGTCCACCAACCCCTTCG 22249
Query 269258 CCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCG 269317
||| ||||| || || |||| || ||||| ||||||||||| |||||||| | |
Sbjct 22248 ACTTCATGGAGAACATCTCCCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTG 22189
Query 269318 ACTATCA 269324
|||| ||
Sbjct 22188 ACTACCA 22182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179641114510962
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |