Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01- 04] 879 sequences; 40,986,545 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq794 129 1e-24 seq404 113 1e-19 seq754 93.3 1e-13 seq44 86.0 1e-11 >seq794 Length=142894 Score = 129 bits (142), Expect = 1e-24 Identities = 169/233 (73%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| || || | || |||||||| | |||| || || |||||||| || || Sbjct 84116 TGGCCACCACGAAGGCGGAGGACGAGATGGAGCGTGGACTCCTTCTGGATATTGTAATCA 84057 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | || || || ||||| || | || || || ||||| || |||||||| ||| || Sbjct 84056 GAAAGAGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGA---TCG 84000 Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420 ||| ||||| || || ||||| || |||| ||||| || || || | ||| || Sbjct 83999 GGGGGAATTCCCTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCCGAAGAC 83940 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||||||||| || ||||| ||||| || |||||||| || |||||||| Sbjct 83939 TCAACTTCGAGCGTAATAGTCTTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 83887 Score = 122 bits (134), Expect = 2e-22 Identities = 157/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || ||||| | |||| || || |||||||| ||||||| | Sbjct 83657 CCACCACGGAGACGGAGGACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCGGAG 83598 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || ||||| |||| || ||||| | || Sbjct 83597 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGA 83538 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| || |||| || || || || || | ||| ||| || || Sbjct 83537 ATACCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCAACC 83478 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 ||||| ||||| ||||| ||||| ||||||||||||| Sbjct 83477 TCGAGGGTGATGGTCTTGCCGGTAAGAGTCTTGACGA 83441 >seq404 Length=95643 Score = 113 bits (124), Expect = 1e-19 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || ||||| || | ||| || || ||||| || ||||||| | Sbjct 37244 CCACCACGAAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 37303 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || ||||||||||| |||||||| ||| Sbjct 37304 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGG 37363 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || || || || || | || || || || Sbjct 37364 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACC 37423 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || || || ||||||||||| || ||||| Sbjct 37424 TCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACGAAGATTTGCAT 37470 >seq754 Length=106820 Score = 93.3 bits (102), Expect = 1e-13 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || || ||||| || || | || ||||| || || || | || ||||| |||||||| Sbjct 63406 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATA 63465 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 |||||||||||| |||||||| || || |||||||| || | ||||| || || Sbjct 63466 AGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCG 63525 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | || || || || || || ||||| ||||| || || || |||||||| || Sbjct 63526 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACAAA 63584 >seq44 Length=30807 Score = 86.0 bits (94), Expect = 1e-11 Identities = 131/187 (70%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 269138 TCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGG 269197 |||| ||| | || |||| ||||| || | |||||||| || || || || ||||| | Sbjct 22368 TCCCCTGTGCCCTGCTCGGCATGAACGCGAACCTCATGAAGCAGTACATTGAGTTCGTCG 22309 Query 269198 CTGATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCG 269257 | || | | || || ||||| | ||||| | |||| || | || ||||||| Sbjct 22308 CCGACAGGCTGCTCGTCGCCCTCGGCAACGAGAAGATCTACAGGTCCACCAACCCCTTCG 22249 Query 269258 CCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCG 269317 ||| ||||| || || |||| || ||||| ||||||||||| |||||||| | | Sbjct 22248 ACTTCATGGAGAACATCTCCCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTG 22189 Query 269318 ACTATCA 269324 |||| || Sbjct 22188 ACTACCA 22182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179641114510962