Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01-
04] 879 sequences; 40,986,545 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq44 176 7e-39
seq802 118 2e-21
>seq44
Length=30807
Score = 176 bits (194), Expect = 7e-39
Identities = 343/499 (69%), Gaps = 11/499 (2%)
Strand=Plus/Plus
Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708
||||||||| |||||||||||||| | | ||| || |||||||| |||| |||||
Sbjct 22199 CTTCTCGAAGAAGTTGGTCTTGCCGCCGAGGGAGATGTTCTCCATGAAGTCGAAGGGGTT 22258
Query 159709 CTTC-ACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATT 159767
| || || ||| |||| ||||| || | |||| |||||| || || || |
Sbjct 22259 GGTGGACCTG-TAGATCTTCTCGTTGCCGAGGGCGACGAGCAGCCTGTCGGCGACGAACT 22317
Query 159768 CGATGTAGCTACA-CATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCC 159826
| ||||| || | ||| | | ||| || || ||||| | |||||| || |||
Sbjct 22318 CAATGTA-CTGCTTCATGAGGTTCGCGTTCATGCCGAGCAGGGCACAGGGGAGGGCCTCC 22376
Query 159827 GACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTT-CGTA 159885
| || ||||||| ||| |||| ||| || ||||| | || | | || | | | |
Sbjct 22377 GTGAGGAACTCCTGCTCGATCTTGACGGCATCGGTGATGATATCCTTGATGAGCTGCTTG 22436
Query 159886 CCCCGGCT-TGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTC 159944
| ||| ||| || ||| |||||||||||||| |||||| || || |
Sbjct 22437 TCGGGGCGGTGCT-----TGAGGTGGGAGAACAGGAGGCACGCGAAGTCGGTATGGAGAC 22491
Query 159945 CCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTT 160004
||||||| || ||||||| ||| ||||| | | ||||||| ||||||| |||||| |
Sbjct 22492 CCTCGTCACGGGAGATGAGCTCATTGGAGAAGGTGAGGCCAGGCATGAGGCCACGCTTCT 22551
Query 160005 TGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACG 160064
||||||| ||||||| || ||||||||||| || ||||| || || ||||| ||||| |
Sbjct 22552 TGAGCCAGAAAATGGAGGCGAAAGCACCGCTGAAGAAGATACCTTCGACGGCGGCAAAGG 22611
Query 160065 CCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAG 160124
| ||||| | || | || | ||| | |||| | |||| | ||||| || |
Sbjct 22612 CAACGAGGCGCTGCGCGAAGGTGGCCTCACGGTCAGCGATCCAACGGAGAGCCCAGTCGG 22671
Query 160125 CCTTCTTTGCGATGCACGG 160143
||||||| |||||| ||
Sbjct 22672 CCTTCTTGCGGATGCAGGG 22690
>seq802
Length=124424
Score = 118 bits (130), Expect = 2e-21
Identities = 461/705 (65%), Gaps = 15/705 (2%)
Strand=Plus/Minus
Query 203838 TCTTG-TCCACCGTGAACTGAATGGCGTTCA-CGGCAGGCCTGC-TTCTCAGATAGTACA 203894
||||| || || ||||||||||| | || | | |||| |||| ||| || ||||||||
Sbjct 52130 TCTTGATCGACAGTGAACTGAATAG-GTGCTGCTGCAG-CCTGAGTTCGCAAATAGTACA 52073
Query 203895 TGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGT 203954
|||| ||||| ||||| || |||||| | ||||||| | | || | || |
Sbjct 52072 TGCCAGTCTTCAGGCCAAGCTTCCACCCAGTGAAGTGCATGCTCGTAATCTTCCCCATGG 52013
Query 203955 TGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCT 204013
|| || ||| || || ||||||||||| || || ||||| ||| || |||||
Sbjct 52012 AAGGCTCCCGCATATGGATATTCAGAGACTGCGACTGATCAATGAA-GGCACCACGATCG 51954
Query 204014 GCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTG 204073
|||||||| | || || ||| ||| || || ||||| || |||||| | | | || ||
Sbjct 51953 GCGGCCATCTGGACAACGGTGCGCTGGGAGATTTCCCAGACGGTCTTGTAGAGGGCTTTG 51894
Query 204074 GTGTGTTGAGGCACATCTTCCCACGTCCTGA-TCGAGCCGTTGTCGGCCATCAGTCTCAT 204132
| | | || | ||| | | |||| | ||||| ||||| || | | |
Sbjct 51893 ATATCCTCGGGAATG-CTTGGGATATTCTGAATAGAGCCACCTTCGGCGATGATGCGGTT 51835
Query 204133 CCTCGTCTCCTCCCCCCACATGCCCAACCTGATCA-GCTCCCGCACCAGGTGGGGGTTGA 204191
| || | ||| ||| | ||| || | | || | ||||| | || |||||||
Sbjct 51834 CTTCATAGAGTCCGACCAAAGGCC-AAGGTCAACAAGATCCCGGAGAAGCCAAGGGTTGA 51776
Query 204192 TGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGA 204251
|| ||| || || |||| || || | ||| | | | ||| |||| | ||||| |
Sbjct 51775 CGACCTGGAATTCGCCGGCCAAGACACGTCGTTGGTAAATGTTCGAGGTGTAGGGTTCAA 51716
Query 204252 ACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCA 204311
| |||||||| |||| ||| |||| ||||| || ||||||||||| |||| | |
Sbjct 51715 AACATTCGTTGTTCCCGAGAATTTGAGATGTGCTTGCAGTGGGCATGGGGGCCAACAAAA 51656
Query 204312 GGGAGTTGCGCACACCGTATTTTTGGACCCTGC-GCTTCAGAGAGGTCCAGTCGTGCATC 204370
|| || || || || | | | || |||| |||||||| ||||| ||
Sbjct 51655 GGCTATTACGGACGCCATGCTGCTTGA-TCTGCTCCTTCAGAGCATCCCAGTTCCACAAG 51597
Query 204371 GCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCC 204430
| |||| || || |||||||||| |||| | || |||||| ||| || |||
Sbjct 51596 TCCGTGGGCTTGACATTCCACATGTCGTACTGGAGAATACCTTGAGAGACAGGAGAACCC 51537
Query 204431 TTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGA 204490
| |||||||| |||||| | ||| | || | || || || ||| || |
Sbjct 51536 TCGTACGTCGAATAAGGGCCCTGCTCCTTGGCGATCTCCATTGACGCCTCCAGAGCCGCA 51477
Query 204491 TAGTACATGGTCTCAAAGATCTGAACGTTTAATCTGGC-GGCCTC 204534
| ||| || ||||||||||| |||| |||| ||| | ||||||
Sbjct 51476 TGGTAGATTGTCTCAAAGATTTGAA-TATTAAGCTGTCGGGCCTC 51433
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795146463232240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |