Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01-
04] 879 sequences; 40,986,545 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq404 156 5e-33
seq794 122 1e-22
seq754 93.3 5e-14
>seq404
Length=95643
Score = 156 bits (172), Expect = 5e-33
Identities = 154/198 (78%), Gaps = 1/198 (1%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||||| || ||||| |||| ||||||||||||||||||||
Sbjct 37279 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 37338
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| |||||| ||||||| || | || |||||||||| |||||| ||||| |
Sbjct 37339 GATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 37398
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | |||||| || || || || | |||||||| |||||||| || || || ||
Sbjct 37399 GTCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGAC 37458
Query 46582 AAAGATTTGCAT-TTTGC 46598
||||||||||| |||||
Sbjct 37459 GAAGATTTGCATGTTTGC 37476
>seq794
Length=142894
Score = 122 bits (134), Expect = 1e-22
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|||||||| | || |||||| ||||||||||||||||| || ||||| | || ||
Sbjct 83639 ACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCCTCA 83580
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
||||||||||||||||| ||||| || || ||||| | || | | ||||||||||
Sbjct 83579 AGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCCTGA 83520
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
|||||| ||||| | | | |||||| ||| || || || | |||||||| |||
Sbjct 83519 ATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCAACCTCGAGGGTGATGGTCTTG 83460
Query 46565 CCCGTCAGCGTTTTAAC 46581
|| || || || || ||
Sbjct 83459 CCGGTAAGAGTCTTGAC 83443
Score = 107 bits (118), Expect = 2e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||||||||| || || ||||| || |||| || |||||||||||||||||
Sbjct 84078 CTCCTTCTGGATATTGTAATCAGAAAGAGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAA 84019
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | |||||||| |||| || | | |||||||||| |||||| ||| | |
Sbjct 84018 AATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCCTGAATCTTCGACTTCACATT 83959
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | || || || || || || | ||| || || ||||| || || || || ||
Sbjct 83958 GTCGATGGTATCCGAAGACTCAACTTCGAGCGTAATAGTCTTGCCGGTAAGGGTCTTGAC 83899
Query 46582 AAAGATTTGCAT 46593
|||||| |||||
Sbjct 83898 AAAGATCTGCAT 83887
Score = 104 bits (114), Expect = 3e-17
Identities = 92/115 (80%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| || |||||||| || || || || || |||| || ||||||||||| |||||
Sbjct 83312 TCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCGAAA 83253
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA 46517
|||| |||||||||||||| || | || |||||||||| ||||||| |||||
Sbjct 83252 ATCAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGA 83198
>seq754
Length=106820
Score = 93.3 bits (102), Expect = 5e-14
Identities = 129/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| || |||||||| || || || ||||| | || ||||||||||| |||||||| |
Sbjct 63404 CCTTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 63463
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
| | ||||| || |||| || | | |||||||||| |||||| ||| | |
Sbjct 63464 TAAGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGGATCTTGGACTTCACATTGT 63523
Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583
| | |||||| || || || || | |||||||| || ||||| || || || ||||
Sbjct 63524 CGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACAA 63583
Query 46584 A 46584
|
Sbjct 63584 A 63584
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565232189443080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |