Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01-
04] 879 sequences; 40,986,545 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq44 201 1e-46
seq404 140 3e-28
seq794 91.5 1e-13
>seq44
Length=30807
Score = 201 bits (222), Expect = 1e-46
Identities = 337/481 (70%), Gaps = 10/481 (2%)
Strand=Plus/Plus
Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684
||||| || || || || || || | | ||| ||| | ||| || || |||||||||
Sbjct 22200 TTCTCGAAGAAGTTGGTCTTGCCGCCGAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTG 22259
Query 132685 GCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741
| | ||||| ||| | |||||| || ||||||||||||||||||| ||||||
Sbjct 22260 GTGGACCTGTAGATCTTCTCGTTGCCGA---GGGCGACGAGCAGCCTGTCGGCGACGAAC 22316
Query 132742 TCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGC-AGCGCTT 132799
|| ||||| ||| |||| | ||||| | | | || ||||| |||| || || || |
Sbjct 22317 TCAATGTACTGCTTCATGAGGTTCGCGTTCATG-CCGAGCAGG-GCACAGGGGAGGGCCT 22374
Query 132800 CGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCG 132859
| ||||| || |||||||| ||| || ||||||| ||| ||| | | | || |
Sbjct 22375 CCGTGAGGAACTCCTGCTCGATCTTGACGGCATCGGTGATGATATCCTTGATGAGCTGCT 22434
Query 132860 CGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCT 132919
| || || ||| | || ||||| | ||| || |||||| ||| | ||||
Sbjct 22435 TGTCGGGGCGGTGCTTGAGGTGGGAGAACAGGAGGCACGCGAAGTCGGTATGGAGACCCT 22494
Query 132920 CGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGA 132979
|||| | ||| ||||| || ||| ||| || | ||| ||||||||||| || || ||||
Sbjct 22495 CGTCACGGGAGATGAGCTCATTGGAGAAGGTGAGGCCAGGCATGAGGCCACGCTTCTTGA 22554
Query 132980 GCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCA 133039
|||| || |||| ||||||| || ||||||| || |||||||| || || || |
Sbjct 22555 GCCAGAAAATGGAGGCGAAAGCACCGCTGAAGAAGATACCTTCGACGGCGGCAAAGGCAA 22614
Query 133040 CCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCT 133099
| ||||||| |||| ||||| || | |||||||| || || ||||| |||||||
Sbjct 22615 CGAGGCGCTGCGCGAAGGTGGCCTCACGGTCAGCGATCCAACGGAGAGCCCAGTCGGCCT 22674
Query 133100 T 133100
|
Sbjct 22675 T 22675
>seq404
Length=95643
Score = 140 bits (154), Expect = 3e-28
Identities = 148/195 (76%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299
||| |||||||| ||||| || || || |||||||| ||||||||| | || |||||| |
Sbjct 37474 AAACATGCAAATCTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAGTC 37415
Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
| | |||| | | | | || || |||| ||||| ||||| || ||| ||||
Sbjct 37414 CTCGGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 37355
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||||||||| || || | ||| ||||| ||||| || |||| ||||||||| ||||||
Sbjct 37354 CCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTA 37295
Query 38420 CAACATCCAAAAGGA 38434
||||||||| |||||
Sbjct 37294 CAACATCCAGAAGGA 37280
>seq794
Length=142894
Score = 91.5 bits (100), Expect = 1e-13
Identities = 166/243 (68%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || ||||| || || || |||| || ||| | |
Sbjct 83887 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAGACTATTACGCTCGAAGTTGAGTCTTCG 83946
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | | | || || || | ||||| |||||||||||| |||| ||
Sbjct 83947 GATACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGAATTCCCCCCGATCAG 84006
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| ||||||| ||| ||||| ||||| || |||| || || || || |||||
Sbjct 84007 CAGCGTCTCATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGTACTCTTTCTGATTACAAT 84066
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCCGCCGCACGCAT 38483
||||| ||||| | ||||| ||| | || || || | | || |||| | ||| ||
Sbjct 84067 ATCCAGAAGGAGTCCACGCTCCATCTCGTCCTCCGCCTTCGTGGTGGCCACTAAACGGAT 84126
Query 38484 GAA 38486
|||
Sbjct 84127 GAA 84129
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500167304351360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |