Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01- 04] 879 sequences; 40,986,545 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq44 201 1e-46 seq404 140 3e-28 seq794 91.5 1e-13 >seq44 Length=30807 Score = 201 bits (222), Expect = 1e-46 Identities = 337/481 (70%), Gaps = 10/481 (2%) Strand=Plus/Plus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 ||||| || || || || || || | | ||| ||| | ||| || || ||||||||| Sbjct 22200 TTCTCGAAGAAGTTGGTCTTGCCGCCGAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTG 22259 Query 132685 GCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741 | | ||||| ||| | |||||| || ||||||||||||||||||| |||||| Sbjct 22260 GTGGACCTGTAGATCTTCTCGTTGCCGA---GGGCGACGAGCAGCCTGTCGGCGACGAAC 22316 Query 132742 TCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGC-AGCGCTT 132799 || ||||| ||| |||| | ||||| | | | || ||||| |||| || || || | Sbjct 22317 TCAATGTACTGCTTCATGAGGTTCGCGTTCATG-CCGAGCAGG-GCACAGGGGAGGGCCT 22374 Query 132800 CGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCG 132859 | ||||| || |||||||| ||| || ||||||| ||| ||| | | | || | Sbjct 22375 CCGTGAGGAACTCCTGCTCGATCTTGACGGCATCGGTGATGATATCCTTGATGAGCTGCT 22434 Query 132860 CGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCT 132919 | || || ||| | || ||||| | ||| || |||||| ||| | |||| Sbjct 22435 TGTCGGGGCGGTGCTTGAGGTGGGAGAACAGGAGGCACGCGAAGTCGGTATGGAGACCCT 22494 Query 132920 CGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGA 132979 |||| | ||| ||||| || ||| ||| || | ||| ||||||||||| || || |||| Sbjct 22495 CGTCACGGGAGATGAGCTCATTGGAGAAGGTGAGGCCAGGCATGAGGCCACGCTTCTTGA 22554 Query 132980 GCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCA 133039 |||| || |||| ||||||| || ||||||| || |||||||| || || || | Sbjct 22555 GCCAGAAAATGGAGGCGAAAGCACCGCTGAAGAAGATACCTTCGACGGCGGCAAAGGCAA 22614 Query 133040 CCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCT 133099 | ||||||| |||| ||||| || | |||||||| || || ||||| ||||||| Sbjct 22615 CGAGGCGCTGCGCGAAGGTGGCCTCACGGTCAGCGATCCAACGGAGAGCCCAGTCGGCCT 22674 Query 133100 T 133100 | Sbjct 22675 T 22675 >seq404 Length=95643 Score = 140 bits (154), Expect = 3e-28 Identities = 148/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| |||||||| ||||| || || || |||||||| ||||||||| | || |||||| | Sbjct 37474 AAACATGCAAATCTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAGTC 37415 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | | |||| | | | | || || |||| ||||| ||||| || ||| |||| Sbjct 37414 CTCGGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 37355 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||||||||| || || | ||| ||||| ||||| || |||| ||||||||| |||||| Sbjct 37354 CCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTA 37295 Query 38420 CAACATCCAAAAGGA 38434 ||||||||| ||||| Sbjct 37294 CAACATCCAGAAGGA 37280 >seq794 Length=142894 Score = 91.5 bits (100), Expect = 1e-13 Identities = 166/243 (68%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| || || || |||| || ||| | | Sbjct 83887 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAGACTATTACGCTCGAAGTTGAGTCTTCG 83946 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || || || | ||||| |||||||||||| |||| || Sbjct 83947 GATACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGAATTCCCCCCGATCAG 84006 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||||| ||| ||||| ||||| || |||| || || || || ||||| Sbjct 84007 CAGCGTCTCATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGTACTCTTTCTGATTACAAT 84066 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCCGCCGCACGCAT 38483 ||||| ||||| | ||||| ||| | || || || | | || |||| | ||| || Sbjct 84067 ATCCAGAAGGAGTCCACGCTCCATCTCGTCCTCCGCCTTCGTGGTGGCCACTAAACGGAT 84126 Query 38484 GAA 38486 ||| Sbjct 84127 GAA 84129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500167304351360