Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01- 04] 879 sequences; 40,986,545 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq794 104 2e-17 seq404 84.2 1e-11 >seq794 Length=142894 Score = 104 bits (114), Expect = 2e-17 Identities = 150/211 (71%), Gaps = 12/211 (6%) Strand=Plus/Minus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| || ||||||||||| || || || ||| | || |||| |||||||| Sbjct 83862 GTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGGGTGCGGCCATCTTCCAGCTG 83803 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || || ||||| || || ||||| || || | || | |||||||| || |||||| Sbjct 83802 CTTACCAGCAAAGATGAGACGTTGTTGATCGGGAGGGATGCCCTCCTTATCCTGAATCTT 83743 Query 34898 CTGTTTGACG-----GATGCTAT-CGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 |||||| |||| ||| |||| | ||||| |||| ||| || || || Sbjct 83742 GGACTTGACGTTGTCGATGGTATCCGAT------GATTCAACTTCGAGGGTAATCGTCTT 83689 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || ||||||||||| |||||||||||| Sbjct 83688 GCCAGTAAGAGTCTTCACGAAGATCTGCATA 83658 Score = 86.0 bits (94), Expect = 4e-12 Identities = 130/183 (71%), Gaps = 8/183 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| || || ||||| || ||| | || |||| || ||||| || ||||| || Sbjct 83621 TCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAA 83562 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | |||||| ||||| | || | ||||||||||| ||||||| ||||| || Sbjct 83561 ATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTCGACTTGAC--AT 83504 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| || | |||||| |||| ||| ||||| || || || |||||||| Sbjct 83503 --TGTCGATGGTGTCGGACGACTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGAGTCTT 83446 Query 34967 CAC 34969 || Sbjct 83445 GAC 83443 Score = 84.2 bits (92), Expect = 1e-11 Identities = 135/192 (70%), Gaps = 8/192 (4%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||| | ||||| ||| ||| |||||||| || || || |||||| |||| | || || Sbjct 83331 AACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCCGTCCTC 83272 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| || || || || || || || |||||||| | || | ||||||||||| Sbjct 83271 AAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTG 83212 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947 |||||| ||||| || | ||||| ||| || ||| || |||| ||| |||| Sbjct 83211 GATCTTCGACTTGAC--AT--TGTCGATGGTATCAGAGGACTCGACCTCGAGGGTGATGG 83156 Query 34948 TTTTTCCCGTGA 34959 | || || |||| Sbjct 83155 TCTTGCCGGTGA 83144 Score = 82.4 bits (90), Expect = 5e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| || || || || ||||| | || | || || ||||| || ||||| || Sbjct 84077 TCCTTCTGGATATTGTAATCAGAAAGAGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAAA 84018 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || | || | ||||||||||| ||||||| || || || Sbjct 84017 ATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCCTGAATCTTCGACTTCAC--AT 83960 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| | ||| | |||||| |||| || || || || || || || ||||| Sbjct 83959 --TGTCGATGGTATCCGAAGACTCAACTTCGAGCGTAATAGTCTTGCCGGTAAGGGTCTT 83902 Query 34967 CACAAAGATCTGCATA 34982 ||||||||||||||| Sbjct 83901 GACAAAGATCTGCATA 83886 >seq404 Length=95643 Score = 84.2 bits (92), Expect = 1e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| || ||| | || | || || ||||| || ||||| || Sbjct 37280 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 37339 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || || ||||| | || | ||||||||||| ||||| ||||| Sbjct 37340 ATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 37399 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || || ||| || || | ||| ||||| || ||||| || ||||| || Sbjct 37400 TCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACG 37459 Query 34971 AAGATCTGCATATT 34984 ||||| ||||| || Sbjct 37460 AAGATTTGCATGTT 37473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324630122261112