Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01-
04] 879 sequences; 40,986,545 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq794 102 7e-16
>seq794
Length=142894
Score = 102 bits (112), Expect = 7e-16
Identities = 156/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316
|||||||| || || |||||||| || || ||| |||||||||| || || |
Sbjct 83876 AGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGGGTGCGG 83817
Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376
|||||| || || || || ||||| || || | ||| ||||| ||||| || || ||
Sbjct 83816 CCATCTTCCAGCTGCTTACCAGCAAAGATGAGACGTTGTTGATCGGGAGGGATGCCCTCC 83757
Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGT 563435
||||| ||||| || || || || || ||||| | ||| | | |||||| ||
Sbjct 83756 TTATCCTGAATCTTGGACTTGACGTTGTCGATGGTATCCGA-TGATTCAACTTCGAGGGT 83698
Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
|| || || ||||||||||| || ||||| || ||||||
Sbjct 83697 AATCGTCTTGCCAGTAAGAGTCTTCACGAAGATCTGCATA 83658
Score = 86.0 bits (94), Expect = 5e-11
Identities = 155/222 (70%), Gaps = 6/222 (3%)
Strand=Plus/Minus
Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314
|| ||||| || ||||| || || ||| | ||| ||||||||||||| ||||| |
Sbjct 84104 AGGCGGAGGACGAGATGGAGCGTGGACTCCTTCTGG--ATATTGTAATCAGAAAGAGTAC 84047
Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374
|| ||||| || || ||||| ||||| || | |||||||| || |||||||| |
Sbjct 84046 GGCCGTCCTCAAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCGGGGGGAATTCCCT 83987
Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGA 563433
| || || ||||| || || || || || ||||| | || | | ||||||
Sbjct 83986 CCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCCG-AAGACTCAACTTCGAGC 83928
Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
|||| ||| || || ||||| || || || || || ||||||
Sbjct 83927 GTAATAGTCTTGCCGGTAAGGGTCTTGACAAAGATCTGCATA 83886
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029249514515710
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |