Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01- 04] 879 sequences; 40,986,545 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq44 132 9e-26 >seq44 Length=30807 Score = 132 bits (146), Expect = 9e-26 Identities = 297/448 (66%), Gaps = 9/448 (2%) Strand=Plus/Minus Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936 |||| || || |||||||| || || || || ||||| ||||||||| | || || ||| Sbjct 22623 AGCGCCTCGTTGCCTTTGCCGCCGTCGAAGGTATCTTCTTCAGCGGTGCTTTCGCCTCCA 22564 Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCA 25996 | |||||||||||| || || |||||| || || ||| ||||| ||||||||| Sbjct 22563 TTTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTCACCTTCTCCAATGAGCTCATCT 22504 Query 25997 GCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCC 26056 | | |||||||||||||| | || || || ||||| || | | | |||| | | Sbjct 22503 CCCGTGACGAGGGTCTCCATACCGACTTCGCGTGCCTCCTGTTCTC---CCACCTCAAGC 22447 Query 26057 ACAAACCTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAG 26115 || || |||| || | || | |||||||| || || || |||||||| || Sbjct 22446 AC-CGCCCCGACAAGCAGCTCATCAAGGATATCATCACCGATGCCGTCAAGATCGAGCAG 22388 Query 26116 GAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGC 26175 ||||| | | ||||||||| | ||||||| Sbjct 22387 GAGTTCCTCACGGAGGCCCTCCCCTGTGCCCTGCTCGGCATGAACGCGAACCTCATGAAG 22328 Query 26176 CAATACATTGAGTATGTGGCCGACCATCTGCT-GT-GCCAGCTGGGACTCGCCAGACTCT 26233 || |||||||||| || |||||| ||||| || ||| || || || | ||| Sbjct 22327 CAGTACATTGAGTTCGTCGCCGACAGGCTGCTCGTCGCC--CTCGGCAACGAGAAGATCT 22270 Query 26234 ACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACT 26293 |||| | | ||||| |||||||| ||||| ||||| || | | || |||||||||| Sbjct 22269 ACAGGTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGCGGCAAGACCAACT 22210 Query 26294 TCTTTGAAAAGAGGGTCGGCGACTATCA 26321 |||| || ||| | || || ||||| || Sbjct 22209 TCTTCGAGAAGCGTGTTGGTGACTACCA 22182 Score = 93.3 bits (102), Expect = 8e-14 Identities = 162/235 (69%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | ||| ||||||||| || ||||| ||||| Sbjct 23101 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCTGAGGAGATCGATCTT 23042 Query 25537 GCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 ||||||| | ||| |||| || |||| || | |||||| || |||| || Sbjct 23041 TCCAAGGATCTCCACGACTGGAACAACAAGCTCAATG--ATGACGAGAAGTATTTCGTCT 22984 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 || | | || ||||| || ||||| || ||||| || |||||||| || ||| Sbjct 22983 CTCACATTCTCGCCTTCTTCGCCGCCTCCGACGGTATTGTCAACGAGAACCTCGTTGAGC 22924 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 |||||| | || || ||| |||||| || ||||||||||||||||| Sbjct 22923 GATTCAGCGCCGAGGTCCAGATTCCCGAGGCCCGCTGCTTCTACGGTTTCCAGAT 22869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928834594317760