Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01-
04] 879 sequences; 40,986,545 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq44 132 9e-26
>seq44
Length=30807
Score = 132 bits (146), Expect = 9e-26
Identities = 297/448 (66%), Gaps = 9/448 (2%)
Strand=Plus/Minus
Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936
|||| || || |||||||| || || || || ||||| ||||||||| | || || |||
Sbjct 22623 AGCGCCTCGTTGCCTTTGCCGCCGTCGAAGGTATCTTCTTCAGCGGTGCTTTCGCCTCCA 22564
Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCA 25996
| |||||||||||| || || |||||| || || ||| ||||| |||||||||
Sbjct 22563 TTTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTCACCTTCTCCAATGAGCTCATCT 22504
Query 25997 GCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCC 26056
| | |||||||||||||| | || || || ||||| || | | | |||| | |
Sbjct 22503 CCCGTGACGAGGGTCTCCATACCGACTTCGCGTGCCTCCTGTTCTC---CCACCTCAAGC 22447
Query 26057 ACAAACCTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAG 26115
|| || |||| || | || | |||||||| || || || |||||||| ||
Sbjct 22446 AC-CGCCCCGACAAGCAGCTCATCAAGGATATCATCACCGATGCCGTCAAGATCGAGCAG 22388
Query 26116 GAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGC 26175
||||| | | ||||||||| | |||||||
Sbjct 22387 GAGTTCCTCACGGAGGCCCTCCCCTGTGCCCTGCTCGGCATGAACGCGAACCTCATGAAG 22328
Query 26176 CAATACATTGAGTATGTGGCCGACCATCTGCT-GT-GCCAGCTGGGACTCGCCAGACTCT 26233
|| |||||||||| || |||||| ||||| || ||| || || || | |||
Sbjct 22327 CAGTACATTGAGTTCGTCGCCGACAGGCTGCTCGTCGCC--CTCGGCAACGAGAAGATCT 22270
Query 26234 ACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACT 26293
|||| | | ||||| |||||||| ||||| ||||| || | | || ||||||||||
Sbjct 22269 ACAGGTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGCGGCAAGACCAACT 22210
Query 26294 TCTTTGAAAAGAGGGTCGGCGACTATCA 26321
|||| || ||| | || || ||||| ||
Sbjct 22209 TCTTCGAGAAGCGTGTTGGTGACTACCA 22182
Score = 93.3 bits (102), Expect = 8e-14
Identities = 162/235 (69%), Gaps = 7/235 (3%)
Strand=Plus/Minus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| | |||||||||||||| | ||| ||||||||| || ||||| |||||
Sbjct 23101 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCTGAGGAGATCGATCTT 23042
Query 25537 GCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591
||||||| | ||| |||| || |||| || | |||||| || |||| ||
Sbjct 23041 TCCAAGGATCTCCACGACTGGAACAACAAGCTCAATG--ATGACGAGAAGTATTTCGTCT 22984
Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651
|| | | || ||||| || ||||| || ||||| || |||||||| || |||
Sbjct 22983 CTCACATTCTCGCCTTCTTCGCCGCCTCCGACGGTATTGTCAACGAGAACCTCGTTGAGC 22924
Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706
|||||| | || || ||| |||||| || |||||||||||||||||
Sbjct 22923 GATTCAGCGCCGAGGTCCAGATTCCCGAGGCCCGCTGCTTCTACGGTTTCCAGAT 22869
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928834594317760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |