Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01- 04] 879 sequences; 40,986,545 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq684 165 1e-34 seq694 163 3e-34 seq44 134 2e-25 seq802 120 4e-21 seq824 113 6e-19 >seq684 Length=110469 Score = 165 bits (182), Expect = 1e-34 Identities = 259/371 (70%), Gaps = 0/371 (0%) Strand=Plus/Plus Query 1573866 GACGGCGACATGCCCAACCTCTTGCTGGCGGGTCCGCCCGGCACGGGCAAGACCACGAGC 1573925 || ||| |||||||| || || | | | || ||| || | ||||| || || ||| Sbjct 28375 GAAGGCAACATGCCCCACGTCATCATCTCCGGAATGCCAGGTATCGGCAAAACGACAAGC 28434 Query 1573926 ATCGCGTGTCTGGCGCGTGTCCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTC 1573985 ||| ||||| ||||| | | || | ||| | |||||||| || |||||| Sbjct 28435 ATCCACTGTCTCGCGCGGCAATTACTTGGAGACGCCTATAAGGAGGCCGTACTAGAACTC 28494 Query 1573986 AACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATCATCAAGCACCACGCCTCC 1574045 ||||| ||||| | ||| ||||||||||||| || |||||| | |||| Sbjct 28495 AACGCCAGCGACGAAAGAGGCATCGACGTCGTGCGAAACCGAATCAAGGGCTTCGCCCAA 28554 Query 1574046 AAGAGGATCGACCTGCCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGC 1574105 |||| || ||| || ||||| ||||||||| | ||||||| ||||| |||||| || Sbjct 28555 AAGAAAGTCACCCTTCCCCCCGGCCGCCACAAGCTCGTCATCCTTGACGAAGCCGACAGC 28614 Query 1574106 CTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACG 1574165 | ||||| | || || || ||||| || |||||||||| || ||||||| ||| Sbjct 28615 ATGACGTCAGGCGCGCAACAAGCCCTCCGCCGAACCATGGAAATCTACTCCAACACCACG 28674 Query 1574166 CGCTTTGCCCTGGCGTGCAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGC 1574225 || || ||| | ||||||||| ||| | | |||||||| |||||||| |||||| Sbjct 28675 CGATTCGCCTTCGCGTGCAACCAGTCCAACAAGATCATCGAGCCCCTCCAATCCCGCTGC 28734 Query 1574226 GCCATTCTGCG 1574236 || ||||| || Sbjct 28735 GCTATTCTTCG 28745 >seq694 Length=148058 Score = 163 bits (180), Expect = 3e-34 Identities = 274/397 (69%), Gaps = 6/397 (2%) Strand=Plus/Plus Query 18092 CCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGT 18151 ||| ||| || || || ||||| | |||||| |||||||||||| | || || Sbjct 13684 CCAGCTTCGGTGAATCCCACGGCAAAGCCGTCGGGTGCATCATCGACAACCCACCCCCCG 13743 Query 18152 GCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGG 18211 ||||| | || |||| |||||||||| || || | | || ||||| || |||||| Sbjct 13744 GCATGACCCTCACCGAATCCGACATCCAACCCCAACTCAACCGCCGCCGCCCAGGCCAGA 13803 Query 18212 GCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGA 18271 || | | ||||||| ||| ||||| || ||||| | |||||| || ||||| || Sbjct 13804 GCTCCATCACCACGCCCCGCGACGAGAAAGACCGCGTAACCATCCAATCCGGCACCGAAT 13863 Query 18272 ACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCG 18331 |||| || |||||| | ||| || ||||| | || ||| |||||||| ||| Sbjct 13864 TCGGCAAGACCCTCGGCACCCCCATCAGCCTCGTCGTCATGAACGAGGACCAGCGCCCCA 13923 Query 18332 TCGACTATTCCGACATGTGCAAGG------TGCCGCGGCCCTCACACGCCGACTACACCT 18385 ||||| | ||| | || || ||||| || || |||||||||| ||||| Sbjct 13924 AGGACTACGGCAACAAGACCATGGACGTCTACCCGCGCCCTTCCCACGCCGACTTCACCT 13983 Query 18386 ACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGA 18445 || | | || |||||||||||||| ||||||||| || |||||||||| Sbjct 13984 ACCTCGAGAAATACGGCATCAAGGCCAGCAGCGGCGGAGGCAGGAGTAGCGCCCGCGAGA 14043 Query 18446 CCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482 | || ||| ||||||||||| || || |||||||| Sbjct 14044 CGATCGCGCGTGTCGCCGCCGGTGCTGTTGCCGAGAA 14080 Score = 95.1 bits (104), Expect = 1e-13 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 19048 ACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGC 19107 |||||| ||||||||| || || ||||| || |||||||| | || |||||||||| Sbjct 14317 ACAGCACCGGCGGCACCGTCACTTGCGTCATCCGGAACGTGCCCTCGGGGCTCGGCGAGC 14376 Query 19108 CGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCA 19167 | ||| |||||| |||||||| | ||| ||||||||| || ||||| ||| || Sbjct 14377 CCGCCTTCGACAAGCTCGAGGCCAAGATCGGTCACGCCATGATGAGCATCCCCGCCGTCA 14436 Query 19168 AGGGATTCGAGATTGGCAGCGGGTT 19192 ||| ||||| || ||| ||| || Sbjct 14437 AGGCCTTCGAAATCGGCTCCGGCTT 14461 >seq44 Length=30807 Score = 134 bits (148), Expect = 2e-25 Identities = 175/242 (72%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| |||| ||||| Sbjct 22176 GCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGGGAGATG 22235 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||||| | | ||||| ||| ||| ||||| | || Sbjct 22236 TTCTCCATGAAGTCGAAGGGGTTGGTGGACCTGTAGATCTTCTCGTTGCCGAGGGCGACG 22295 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||| | ||||||||| ||||| |||||||| ||||||| ||||||||||||| Sbjct 22296 AGCAGCCTGTCGGCGACGAACTCAATGTACTGCTTCATGAGGTTCGCGTTCATGCCGAGC 22355 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || || | ||| | | ||||| | |||||||| |||||| ||| |||| Sbjct 22356 AGGGCACAGGGGAGGGCCTCCGTGAGGAACTCCTGCTCGATCTTGACGGCATCGGTGATG 22415 Query 868931 AT 868932 || Sbjct 22416 AT 22417 Score = 100 bits (110), Expect = 3e-15 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| || ||| | || ||| |||| |||||| ||||||||||| ||||| Sbjct 22490 ACCCTCGTCACGGGAGATGAGCTCATTGGAGAAGGTGAGGCCAGGCATGAGGCCACGCTT 22549 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| || |||| | |||| || ||| ||||| || |||||||||||||| Sbjct 22550 CTTGAGCCAGAAAATGGAGGCGAAAGCACCGCTGAAGAAGATACCTTCGACGGCGGCAAA 22609 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTG 869323 | | | ||| |||| || |||||| Sbjct 22610 GGCAACGAGGCGCTGCGCGAAGGTG 22634 >seq802 Length=124424 Score = 120 bits (132), Expect = 4e-21 Identities = 262/390 (67%), Gaps = 17/390 (4%) Strand=Plus/Minus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 ||||| ||||| | || |||| ||| ||||| || |||||||| | | |||||||||| Sbjct 50726 TGGTCAACGTACCTGGCTGTGTTGTTGAAGACACGAAGCATGGGAATAATGCCGTTGGAC 50667 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 ||||| || ||||| | || | ||| | ||| || | || | | |||| Sbjct 50666 GTTCCGTTTGTCCCCGCAATATATGAGCCTGTGGCACGAATGCGATGGATGTTGAGGCCG 50607 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGT-TTGAGCGTGTCGTAGATGCCCTC 1630244 ||||| |||||| || ||||| | ||||| ||| || | ||||| || || ||||| Sbjct 50606 ATGCCACCGGCCATTTTTGAGATCATTGCGCA-TGTCTTCAATGTGTCATAAATTCCCTC 50548 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || ||| |||||||||| ||||| |||||||| || || | || | ||||| Sbjct 50547 AATACTGTCATCCTTCATGTCGACGAGGAAGCACGAGGACAACTGGGCTTGGGGTGTGCC 50488 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 |||||| ||||| ||||| | || |||||| || | |||||| | ||| || Sbjct 50487 GGCGTTAAAGAGAGTGGGTGAAGCATGGGTGAAGAATTTGGACGACATTAGATTGTACGT 50428 Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424 | | ||| ||| | | ||||| || ||| ||| || | ||||| Sbjct 50427 CTCAATCACACGCTCAACGTCATCGCCC-------CAA----ATA----CCAACAGCGAC 50383 Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGAC 1630454 ||||||| ||||| ||| || |||||||| Sbjct 50382 ACGCATGATCATGTGCTGAGGTCGCTCGAC 50353 >seq824 Length=54634 Score = 113 bits (124), Expect = 6e-19 Identities = 94/115 (82%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||| ||||||||||||| |||||||| || || || | || |||||| | || |||||| Sbjct 13686 GCCTCCAACTACCTCGATATCAAGCCGCTACTGGACGTCGGTTGCAAGACGGTCGCCAAC 13745 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||| ||||| || || |||||||||||||| || ||||| | | ||| Sbjct 13746 ATGATCAAGGGGAAGTCCCCTGACGAGATCCGCAAGACTTTCAACATTACGAACG 13800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107067065143643