Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01-
04] 879 sequences; 40,986,545 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq684 165 1e-34
seq694 163 3e-34
seq44 134 2e-25
seq802 120 4e-21
seq824 113 6e-19
>seq684
Length=110469
Score = 165 bits (182), Expect = 1e-34
Identities = 259/371 (70%), Gaps = 0/371 (0%)
Strand=Plus/Plus
Query 1573866 GACGGCGACATGCCCAACCTCTTGCTGGCGGGTCCGCCCGGCACGGGCAAGACCACGAGC 1573925
|| ||| |||||||| || || | | | || ||| || | ||||| || || |||
Sbjct 28375 GAAGGCAACATGCCCCACGTCATCATCTCCGGAATGCCAGGTATCGGCAAAACGACAAGC 28434
Query 1573926 ATCGCGTGTCTGGCGCGTGTCCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTC 1573985
||| ||||| ||||| | | || | ||| | |||||||| || ||||||
Sbjct 28435 ATCCACTGTCTCGCGCGGCAATTACTTGGAGACGCCTATAAGGAGGCCGTACTAGAACTC 28494
Query 1573986 AACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATCATCAAGCACCACGCCTCC 1574045
||||| ||||| | ||| ||||||||||||| || |||||| | ||||
Sbjct 28495 AACGCCAGCGACGAAAGAGGCATCGACGTCGTGCGAAACCGAATCAAGGGCTTCGCCCAA 28554
Query 1574046 AAGAGGATCGACCTGCCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGC 1574105
|||| || ||| || ||||| ||||||||| | ||||||| ||||| |||||| ||
Sbjct 28555 AAGAAAGTCACCCTTCCCCCCGGCCGCCACAAGCTCGTCATCCTTGACGAAGCCGACAGC 28614
Query 1574106 CTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACG 1574165
| ||||| | || || || ||||| || |||||||||| || ||||||| |||
Sbjct 28615 ATGACGTCAGGCGCGCAACAAGCCCTCCGCCGAACCATGGAAATCTACTCCAACACCACG 28674
Query 1574166 CGCTTTGCCCTGGCGTGCAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGC 1574225
|| || ||| | ||||||||| ||| | | |||||||| |||||||| ||||||
Sbjct 28675 CGATTCGCCTTCGCGTGCAACCAGTCCAACAAGATCATCGAGCCCCTCCAATCCCGCTGC 28734
Query 1574226 GCCATTCTGCG 1574236
|| ||||| ||
Sbjct 28735 GCTATTCTTCG 28745
>seq694
Length=148058
Score = 163 bits (180), Expect = 3e-34
Identities = 274/397 (69%), Gaps = 6/397 (2%)
Strand=Plus/Plus
Query 18092 CCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGT 18151
||| ||| || || || ||||| | |||||| |||||||||||| | || ||
Sbjct 13684 CCAGCTTCGGTGAATCCCACGGCAAAGCCGTCGGGTGCATCATCGACAACCCACCCCCCG 13743
Query 18152 GCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGG 18211
||||| | || |||| |||||||||| || || | | || ||||| || ||||||
Sbjct 13744 GCATGACCCTCACCGAATCCGACATCCAACCCCAACTCAACCGCCGCCGCCCAGGCCAGA 13803
Query 18212 GCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGA 18271
|| | | ||||||| ||| ||||| || ||||| | |||||| || ||||| ||
Sbjct 13804 GCTCCATCACCACGCCCCGCGACGAGAAAGACCGCGTAACCATCCAATCCGGCACCGAAT 13863
Query 18272 ACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCG 18331
|||| || |||||| | ||| || ||||| | || ||| |||||||| |||
Sbjct 13864 TCGGCAAGACCCTCGGCACCCCCATCAGCCTCGTCGTCATGAACGAGGACCAGCGCCCCA 13923
Query 18332 TCGACTATTCCGACATGTGCAAGG------TGCCGCGGCCCTCACACGCCGACTACACCT 18385
||||| | ||| | || || ||||| || || |||||||||| |||||
Sbjct 13924 AGGACTACGGCAACAAGACCATGGACGTCTACCCGCGCCCTTCCCACGCCGACTTCACCT 13983
Query 18386 ACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGA 18445
|| | | || |||||||||||||| ||||||||| || ||||||||||
Sbjct 13984 ACCTCGAGAAATACGGCATCAAGGCCAGCAGCGGCGGAGGCAGGAGTAGCGCCCGCGAGA 14043
Query 18446 CCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482
| || ||| ||||||||||| || || ||||||||
Sbjct 14044 CGATCGCGCGTGTCGCCGCCGGTGCTGTTGCCGAGAA 14080
Score = 95.1 bits (104), Expect = 1e-13
Identities = 108/145 (74%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 19048 ACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGC 19107
|||||| ||||||||| || || ||||| || |||||||| | || ||||||||||
Sbjct 14317 ACAGCACCGGCGGCACCGTCACTTGCGTCATCCGGAACGTGCCCTCGGGGCTCGGCGAGC 14376
Query 19108 CGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCA 19167
| ||| |||||| |||||||| | ||| ||||||||| || ||||| ||| ||
Sbjct 14377 CCGCCTTCGACAAGCTCGAGGCCAAGATCGGTCACGCCATGATGAGCATCCCCGCCGTCA 14436
Query 19168 AGGGATTCGAGATTGGCAGCGGGTT 19192
||| ||||| || ||| ||| ||
Sbjct 14437 AGGCCTTCGAAATCGGCTCCGGCTT 14461
>seq44
Length=30807
Score = 134 bits (148), Expect = 2e-25
Identities = 175/242 (72%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || || ||| |||||| |||||||||||||| |||| |||||
Sbjct 22176 GCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCGAGGGAGATG 22235
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
|||||| | ||| ||||||| | | ||||| ||| ||| ||||| | ||
Sbjct 22236 TTCTCCATGAAGTCGAAGGGGTTGGTGGACCTGTAGATCTTCTCGTTGCCGAGGGCGACG 22295
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
||||| | ||||||||| ||||| |||||||| ||||||| |||||||||||||
Sbjct 22296 AGCAGCCTGTCGGCGACGAACTCAATGTACTGCTTCATGAGGTTCGCGTTCATGCCGAGC 22355
Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930
|| || || || | ||| | | ||||| | |||||||| |||||| ||| ||||
Sbjct 22356 AGGGCACAGGGGAGGGCCTCCGTGAGGAACTCCTGCTCGATCTTGACGGCATCGGTGATG 22415
Query 868931 AT 868932
||
Sbjct 22416 AT 22417
Score = 100 bits (110), Expect = 3e-15
Identities = 109/145 (75%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||| ||||| || ||| | || ||| |||| |||||| ||||||||||| |||||
Sbjct 22490 ACCCTCGTCACGGGAGATGAGCTCATTGGAGAAGGTGAGGCCAGGCATGAGGCCACGCTT 22549
Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298
||||||||| || |||| | |||| || ||| ||||| || ||||||||||||||
Sbjct 22550 CTTGAGCCAGAAAATGGAGGCGAAAGCACCGCTGAAGAAGATACCTTCGACGGCGGCAAA 22609
Query 869299 GCCGATGAGCCGCTCGGCAAAGGTG 869323
| | | ||| |||| || ||||||
Sbjct 22610 GGCAACGAGGCGCTGCGCGAAGGTG 22634
>seq802
Length=124424
Score = 120 bits (132), Expect = 4e-21
Identities = 262/390 (67%), Gaps = 17/390 (4%)
Strand=Plus/Minus
Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125
||||| ||||| | || |||| ||| ||||| || |||||||| | | ||||||||||
Sbjct 50726 TGGTCAACGTACCTGGCTGTGTTGTTGAAGACACGAAGCATGGGAATAATGCCGTTGGAC 50667
Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185
||||| || ||||| | || | ||| | ||| || | || | | ||||
Sbjct 50666 GTTCCGTTTGTCCCCGCAATATATGAGCCTGTGGCACGAATGCGATGGATGTTGAGGCCG 50607
Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGT-TTGAGCGTGTCGTAGATGCCCTC 1630244
||||| |||||| || ||||| | ||||| ||| || | ||||| || || |||||
Sbjct 50606 ATGCCACCGGCCATTTTTGAGATCATTGCGCA-TGTCTTCAATGTGTCATAAATTCCCTC 50548
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
|| ||| |||||||||| ||||| |||||||| || || | || | |||||
Sbjct 50547 AATACTGTCATCCTTCATGTCGACGAGGAAGCACGAGGACAACTGGGCTTGGGGTGTGCC 50488
Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364
|||||| ||||| ||||| | || |||||| || | |||||| | ||| ||
Sbjct 50487 GGCGTTAAAGAGAGTGGGTGAAGCATGGGTGAAGAATTTGGACGACATTAGATTGTACGT 50428
Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424
| | ||| ||| | | ||||| || ||| ||| || | |||||
Sbjct 50427 CTCAATCACACGCTCAACGTCATCGCCC-------CAA----ATA----CCAACAGCGAC 50383
Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGAC 1630454
||||||| ||||| ||| || ||||||||
Sbjct 50382 ACGCATGATCATGTGCTGAGGTCGCTCGAC 50353
>seq824
Length=54634
Score = 113 bits (124), Expect = 6e-19
Identities = 94/115 (82%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
||| ||||||||||||| |||||||| || || || | || |||||| | || ||||||
Sbjct 13686 GCCTCCAACTACCTCGATATCAAGCCGCTACTGGACGTCGGTTGCAAGACGGTCGCCAAC 13745
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300
||||||||||| ||||| || || |||||||||||||| || ||||| | | |||
Sbjct 13746 ATGATCAAGGGGAAGTCCCCTGACGAGATCCGCAAGACTTTCAACATTACGAACG 13800
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107067065143643
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |