Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01- 04] 879 sequences; 40,986,545 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq44 158 2e-32 seq684 141 1e-27 seq824 104 4e-16 seq395 86.0 1e-10 >seq44 Length=30807 Score = 158 bits (174), Expect = 2e-32 Identities = 198/270 (73%), Gaps = 4/270 (1%) Strand=Plus/Plus Query 793873 TCCTCTCCGTCCTCGATGTGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAA 793932 |||||| || || | ||||||| ||||| || || || || ||| |||||| | Sbjct 22150 TCCTCTTAGTGCTGGCCATGACGCCGGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGA 22209 Query 793933 AGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGT 793992 ||||||||||||| |||| ||||| |||||| | ||| ||||||| | | || Sbjct 22210 AGTTGGTCTTGCCGCCGAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGACCTGT 22269 Query 793993 AGTGCTTCTCGCACCCGA--GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTG 794050 || ||||||| |||| |||||| ||||| | |||||||||||| ||||||||||| Sbjct 22270 AGATCTTCTCGTTGCCGAGGGCGACG--AGCAGCCTGTCGGCGACGAACTCAATGTACTG 22327 Query 794051 GCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTC 794110 ||||||| ||||||||||||| || || ||| || | ||| ||| ||||| Sbjct 22328 CTTCATGAGGTTCGCGTTCATGCCGAGCAGGGCACAGGGGAGGGCCTCCGTGAGGAACTC 22387 Query 794111 TTTCTCGATCTCGACGGCCTCGATGATGAT 794140 | |||||||| |||||| ||| ||||||| Sbjct 22388 CTGCTCGATCTTGACGGCATCGGTGATGAT 22417 Score = 107 bits (118), Expect = 3e-17 Identities = 98/121 (81%), Gaps = 2/121 (2%) Strand=Plus/Plus Query 794548 GTGTCGATGGCGCGAAAGAGGTG-GTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGAT 794606 || || |||||| |||||||| ||||| || | | || ||||||| ||||||||| || Sbjct 22770 GTATCAATGGCGTTGAAGAGGTGAGTCCT-CTGGGCGGGCTCCTTGATGTAGGTGTCAAT 22828 Query 794607 GAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 |||||| ||||||||||| ||||||||||| || || ||||||||| || || ||||| Sbjct 22829 GAGGAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCA 22888 Query 794667 G 794667 | Sbjct 22889 G 22889 Score = 91.5 bits (100), Expect = 2e-12 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| || ||| | || ||| ||| |||||| ||||||||||| ||||| Sbjct 22490 ACCCTCGTCACGGGAGATGAGCTCATTGGAGAAGGTGAGGCCAGGCATGAGGCCACGCTT 22549 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||| || |||| |||| || ||| ||||| || |||||||||||||| Sbjct 22550 CTTGAGCCAGAAAATGGAGGCGAAAGCACCGCTGAAGAAGATACCTTCGACGGCGGCAAA 22609 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCC 794487 | | ||||| |||| || || ||| || Sbjct 22610 GGCAACGAGGCGCTGCGCGAAGGTGGCC 22637 >seq684 Length=110469 Score = 141 bits (156), Expect = 1e-27 Identities = 298/443 (67%), Gaps = 10/443 (2%) Strand=Plus/Plus Query 2019003 GACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGCCCGGCACGGGCAAGACCACGAGC 2019062 || |||||||||||| || || | | | || ||| || | ||||| || || ||| Sbjct 28375 GAAGGCAACATGCCCCACGTCATCATCTCCGGAATGCCAGGTATCGGCAAAACGACAAGC 28434 Query 2019063 ATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTC 2019122 ||| || || ||||| | | || | ||| | |||||||| || |||||| Sbjct 28435 ATCCACTGTCTCGCGCGGCAATTACTTGGAGACGCCTATAAGGAGGCCGTACTAGAACTC 28494 Query 2019123 AATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATCATCAAGCATCACGCTTCG 2019182 || || ||||| | ||| | ||||||||||| | |||||| |||||| Sbjct 28495 AACGCCAGCGACGAAAGAGGCATCGACGTCGTGCGAAACCGAATCAAGG-----GCTTCG 28549 Query 2019183 ---AAAAGAA--TCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCG 2019237 ||||||| || ||| || ||||||||||||||| | ||||||| || || |||| Sbjct 28550 CCCAAAAGAAAGTCACCCTTCCCCCCGGCCGCCACAAGCTCGTCATCCTTGACGAAGCCG 28609 Query 2019238 ACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACA 2019297 || || | ||||| | || || || |||||||| |||||||||| ||| |||||| Sbjct 28610 ACAGCATGACGTCAGGCGCGCAACAAGCCCTCCGCCGAACCATGGAAATCTACTCCAACA 28669 Query 2019298 CGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCC 2019357 | ||||| || || | || |||||| ||| | | ||||||| ||||||| || Sbjct 28670 CCACGCGATTCGCCTTCGCGTGCAACCAGTCCAACAAGATCATCGAGCCCCTCCAATCCC 28729 Query 2019358 GTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCG 2019417 | ||||| || | || | |||| | || ||||| || | | | | ||| Sbjct 28730 GCTGCGCTATTCTTCGGTACTCGCGGTTAACGGACGCGCAAGTGGTGAAGAGGCTGATGC 28789 Query 2019418 AGATTATCGACGCCGAAAAGGTC 2019440 |||| ||||| || ||||||||| Sbjct 28790 AGATCATCGAGGCGGAAAAGGTC 28812 >seq824 Length=54634 Score = 104 bits (114), Expect = 4e-16 Identities = 92/115 (80%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||| ||||||||||||| |||||||| || || || | || |||||||| || |||||| Sbjct 13686 GCCTCCAACTACCTCGATATCAAGCCGCTACTGGACGTCGGTTGCAAGACGGTCGCCAAC 13745 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | |||||||| ||||| || || || ||||||||||| || ||||| | | ||| Sbjct 13746 ATGATCAAGGGGAAGTCCCCTGACGAGATCCGCAAGACTTTCAACATTACGAACG 13800 >seq395 Length=144774 Score = 86.0 bits (94), Expect = 1e-10 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 429664 CCTACAACGCCGACTTTGACGGCGACGAGATGAACCTGCACGTGCCCCAGTCGGAGATGG 429723 ||||||||||||| ||||| |||||||||||||||||||| || |||||| |||| || Sbjct 115138 CCTACAACGCCGATTTTGATGGCGACGAGATGAACCTGCATGTTCCCCAGACGGAAGAGG 115079 Query 429724 CACGCGCCGAAG 429735 | || ||||||| Sbjct 115078 CGCGGGCCGAAG 115067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916152896760881