Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01-
04] 879 sequences; 40,986,545 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq44 158 2e-32
seq684 141 1e-27
seq824 104 4e-16
seq395 86.0 1e-10
>seq44
Length=30807
Score = 158 bits (174), Expect = 2e-32
Identities = 198/270 (73%), Gaps = 4/270 (1%)
Strand=Plus/Plus
Query 793873 TCCTCTCCGTCCTCGATGTGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAA 793932
|||||| || || | ||||||| ||||| || || || || ||| |||||| |
Sbjct 22150 TCCTCTTAGTGCTGGCCATGACGCCGGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGA 22209
Query 793933 AGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGT 793992
||||||||||||| |||| ||||| |||||| | ||| ||||||| | | ||
Sbjct 22210 AGTTGGTCTTGCCGCCGAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGACCTGT 22269
Query 793993 AGTGCTTCTCGCACCCGA--GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTG 794050
|| ||||||| |||| |||||| ||||| | |||||||||||| |||||||||||
Sbjct 22270 AGATCTTCTCGTTGCCGAGGGCGACG--AGCAGCCTGTCGGCGACGAACTCAATGTACTG 22327
Query 794051 GCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTC 794110
||||||| ||||||||||||| || || ||| || | ||| ||| |||||
Sbjct 22328 CTTCATGAGGTTCGCGTTCATGCCGAGCAGGGCACAGGGGAGGGCCTCCGTGAGGAACTC 22387
Query 794111 TTTCTCGATCTCGACGGCCTCGATGATGAT 794140
| |||||||| |||||| ||| |||||||
Sbjct 22388 CTGCTCGATCTTGACGGCATCGGTGATGAT 22417
Score = 107 bits (118), Expect = 3e-17
Identities = 98/121 (81%), Gaps = 2/121 (2%)
Strand=Plus/Plus
Query 794548 GTGTCGATGGCGCGAAAGAGGTG-GTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGAT 794606
|| || |||||| |||||||| ||||| || | | || ||||||| ||||||||| ||
Sbjct 22770 GTATCAATGGCGTTGAAGAGGTGAGTCCT-CTGGGCGGGCTCCTTGATGTAGGTGTCAAT 22828
Query 794607 GAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666
|||||| ||||||||||| ||||||||||| || || ||||||||| || || |||||
Sbjct 22829 GAGGAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCA 22888
Query 794667 G 794667
|
Sbjct 22889 G 22889
Score = 91.5 bits (100), Expect = 2e-12
Identities = 109/148 (74%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| ||||| || ||| | || ||| ||| |||||| ||||||||||| |||||
Sbjct 22490 ACCCTCGTCACGGGAGATGAGCTCATTGGAGAAGGTGAGGCCAGGCATGAGGCCACGCTT 22549
Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459
||||||||| || |||| |||| || ||| ||||| || ||||||||||||||
Sbjct 22550 CTTGAGCCAGAAAATGGAGGCGAAAGCACCGCTGAAGAAGATACCTTCGACGGCGGCAAA 22609
Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCC 794487
| | ||||| |||| || || ||| ||
Sbjct 22610 GGCAACGAGGCGCTGCGCGAAGGTGGCC 22637
>seq684
Length=110469
Score = 141 bits (156), Expect = 1e-27
Identities = 298/443 (67%), Gaps = 10/443 (2%)
Strand=Plus/Plus
Query 2019003 GACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGCCCGGCACGGGCAAGACCACGAGC 2019062
|| |||||||||||| || || | | | || ||| || | ||||| || || |||
Sbjct 28375 GAAGGCAACATGCCCCACGTCATCATCTCCGGAATGCCAGGTATCGGCAAAACGACAAGC 28434
Query 2019063 ATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTC 2019122
||| || || ||||| | | || | ||| | |||||||| || ||||||
Sbjct 28435 ATCCACTGTCTCGCGCGGCAATTACTTGGAGACGCCTATAAGGAGGCCGTACTAGAACTC 28494
Query 2019123 AATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATCATCAAGCATCACGCTTCG 2019182
|| || ||||| | ||| | ||||||||||| | |||||| ||||||
Sbjct 28495 AACGCCAGCGACGAAAGAGGCATCGACGTCGTGCGAAACCGAATCAAGG-----GCTTCG 28549
Query 2019183 ---AAAAGAA--TCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCG 2019237
||||||| || ||| || ||||||||||||||| | ||||||| || || ||||
Sbjct 28550 CCCAAAAGAAAGTCACCCTTCCCCCCGGCCGCCACAAGCTCGTCATCCTTGACGAAGCCG 28609
Query 2019238 ACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACA 2019297
|| || | ||||| | || || || |||||||| |||||||||| ||| ||||||
Sbjct 28610 ACAGCATGACGTCAGGCGCGCAACAAGCCCTCCGCCGAACCATGGAAATCTACTCCAACA 28669
Query 2019298 CGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCC 2019357
| ||||| || || | || |||||| ||| | | ||||||| ||||||| ||
Sbjct 28670 CCACGCGATTCGCCTTCGCGTGCAACCAGTCCAACAAGATCATCGAGCCCCTCCAATCCC 28729
Query 2019358 GTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCG 2019417
| ||||| || | || | |||| | || ||||| || | | | | |||
Sbjct 28730 GCTGCGCTATTCTTCGGTACTCGCGGTTAACGGACGCGCAAGTGGTGAAGAGGCTGATGC 28789
Query 2019418 AGATTATCGACGCCGAAAAGGTC 2019440
|||| ||||| || |||||||||
Sbjct 28790 AGATCATCGAGGCGGAAAAGGTC 28812
>seq824
Length=54634
Score = 104 bits (114), Expect = 4e-16
Identities = 92/115 (80%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
||| ||||||||||||| |||||||| || || || | || |||||||| || ||||||
Sbjct 13686 GCCTCCAACTACCTCGATATCAAGCCGCTACTGGACGTCGGTTGCAAGACGGTCGCCAAC 13745
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761
| |||||||| ||||| || || || ||||||||||| || ||||| | | |||
Sbjct 13746 ATGATCAAGGGGAAGTCCCCTGACGAGATCCGCAAGACTTTCAACATTACGAACG 13800
>seq395
Length=144774
Score = 86.0 bits (94), Expect = 1e-10
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 429664 CCTACAACGCCGACTTTGACGGCGACGAGATGAACCTGCACGTGCCCCAGTCGGAGATGG 429723
||||||||||||| ||||| |||||||||||||||||||| || |||||| |||| ||
Sbjct 115138 CCTACAACGCCGATTTTGATGGCGACGAGATGAACCTGCATGTTCCCCAGACGGAAGAGG 115079
Query 429724 CACGCGCCGAAG 429735
| || |||||||
Sbjct 115078 CGCGGGCCGAAG 115067
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916152896760881
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |