Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01-
04] 879 sequences; 40,986,545 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq44 150 3e-30
seq684 120 4e-21
seq802 118 2e-20
>seq44
Length=30807
Score = 150 bits (166), Expect = 3e-30
Identities = 196/266 (74%), Gaps = 4/266 (2%)
Strand=Plus/Minus
Query 1456516 CAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCC 1456575
|||| | |||||| ||| |||||| |||||||| | ||||| ||| ||| | || ||
Sbjct 22424 CAAGGATATCATCACCGATGCCGTCAAGATCGAGCAGGAGTTCCTCACGGAGGCCCTCCC 22365
Query 1456576 GGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCC 1456635
|| || ||||||||||||| | | |||||| ||||||||||| || ||||||
Sbjct 22364 CTGTGCCCTGCTCGGCATGAACGCGAAC-CTCATGAAGCAGTACATTGAGTTC-GTCGCC 22307
Query 1456636 GACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCC 1456695
||| | ||||||| || |||||| || ||||| |||| || | ||||||| |||
Sbjct 22306 GACAGGCTGCTCGTCGCCCTCGGCAACG-AGAAGATCTACAGGTCCACCAACCCCTTCGA 22248
Query 1456696 ATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGA 1456754
| |||||| ||||| |||| |||||||||||||| |||||| || | ||| ||
Sbjct 22247 CTTCATGGAGAACATCTCCCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGA 22188
Query 1456755 GTACGCCAAGGCCGGCGTCACCGCCA 1456780
||| ||||||||||||| ||||
Sbjct 22187 CTACCAGAAGGCCGGCGTCATGGCCA 22162
Score = 150 bits (166), Expect = 3e-30
Identities = 247/348 (71%), Gaps = 16/348 (5%)
Strand=Plus/Minus
Query 1455767 TACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGA 1455826
||||| | ||| ||| |||||||| || |||||||||||||| || |||||||| |||||
Sbjct 23109 TACCA-CAGATCTGGCAAATGTAC-AAGAAGGCCGAGGCCTCTTTCTGGACCGCTGAGGA 23052
Query 1455827 GGTCGACCTCGGCGCCGA----CACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGC 1455879
| |||| || | || |||| ||||| ||| | || ||||||
Sbjct 23051 GATCGATCTTTCCAAGGATCTCCACG----ACTGGAACAACAAGCTCAATGATGACGAGA 22996
Query 1455880 GCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAG 1455939
||||| || ||| | |||||||| || ||||||| ||| || || || ||||
Sbjct 22995 AGTATTTCGTCTCTCACATTCTCGCCTTCTT-CGCCGCCTCCGACGGTATTGTCAACGAG 22937
Query 1455940 AACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGG 1455999
||||| | | || || | |||||||| | || ||||| || | || |||||
Sbjct 22936 AACCTCGTTGAGCGATTCAGCGCCGAGGTCCAGATTCCCGAGGCCCGCTGCTTCTACGGT 22877
Query 1456000 TTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTAC 1456059
||||||||| || || ||||||||||| || |||||||| ||||| || |||||||||
Sbjct 22876 TTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCTCCTCATTGACACCTAC 22817
Query 1456060 GTCAAGGACCCGGTCGAGAAGGAC-CACCTCTTTCGCGCCATCGACAC 1456106
||||||| || | | || ||||| |||||||| |||||| || ||
Sbjct 22816 ATCAAGGAGCCCGCCCAG-AGGACTCACCTCTTCAACGCCATTGATAC 22770
>seq684
Length=110469
Score = 120 bits (132), Expect = 4e-21
Identities = 249/371 (67%), Gaps = 0/371 (0%)
Strand=Plus/Minus
Query 332876 CGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTGCAGGCC 332935
|| || || || || ||| || |||| |||||||| | | ||| |||||| ||
Sbjct 28745 CGAAGAATAGCGCAGCGGGATTGGAGGGGCTCGATGATCTTGTTGGACTGGTTGCACGCG 28686
Query 332936 AGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGGGCC 332995
| ||| || ||||| || |||| | |||||||||| |||||||| ||||| ||
Sbjct 28685 AAGGCGAATCGCGTGGTGTTGGAGTAGATTTCCATGGTTCGGCGGAGGGCTTGTTGCGCG 28626
Query 332996 GCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGGCAGA 333055
| | ||| | || |||||| ||||| ||||||| || ||||||||| ||| | || ||
Sbjct 28625 CCTGACGTCATGCTGTCGGCTTCGTCAAGGATGACGAGCTTGTGGCGGCCGGGGGGAAGG 28566
Query 333056 TCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCACGACGTCCACGCCGCGCTCG 333115
|| | || |||| | ||||| || ||||||||||| | ||| | |||
Sbjct 28565 GTGACTTTCTTTTGGGCGAAGCCCTTGATTCGGTTTCGCACGACGTCGATGCCTCTTTCG 28506
Query 333116 TCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGCGGCCGCACCCAAGAGGACGCGCGCC 333175
|| ||||||||||| || |||||||| | ||| | || | | |||||
Sbjct 28505 TCGCTGGCGTTGAGTTCTAGTACGGCCTCCTTATAGGCGTCTCCAAGTAATTGCCGCGCG 28446
Query 333176 AGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGCGGACCCGCCAGCAAGAGGTTGGGC 333235
|| || |||||| || || ||||| | || ||| || | | | || || ||||
Sbjct 28445 AGACAGTGGATGCTTGTCGTTTTGCCGATACCTGGCATTCCGGAGATGATGACGTGGGGC 28386
Query 333236 ATGTTGCCGTC 333246
|||||||| ||
Sbjct 28385 ATGTTGCCTTC 28375
>seq802
Length=124424
Score = 118 bits (130), Expect = 2e-20
Identities = 264/391 (68%), Gaps = 19/391 (5%)
Strand=Plus/Plus
Query 259793 GTCGAGCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGAC 259852
|||||||| || ||| | ||| ||||||||||||| |||| ||| ||| | |||
Sbjct 50353 GTCGAGCGACCTCAGCACATGATCATGCGTGTCGCTGTTGGT-ATTTGGGGC--GATGAC 50409
Query 259853 GTCGACAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTGTTC 259912
|| || || | | ||| |||| | | ||| |||||| | || |||
Sbjct 50410 GTTGAGCGTGTGATTGAG-ACGTACA----ATCTA-------ATGTCGTCCAAATTCTTC 50457
Query 259913 ACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGC 259972
||| || | ||||| |||||||| |||||||| || | | ||| || ||||||
Sbjct 50458 ACCCATGCTTCACCCACTCTCTTTAACGCCGGCACACCCCAAGCCCAGTTGTCCTCGTGC 50517
Query 259973 TTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGC 260032
|| || | |||||||||| || || ||||| || |||||||| | ||| |||
Sbjct 50518 TTCCTCGTCGACATGAAGGATGACAGTATTGAGGGAATTTATGACACATTGAAGACATGC 50577
Query 260033 GCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGG--TGCGCGCCG 260090
|| | ||||| || |||||| |||||||| | | || || | | || |||
Sbjct 50578 GCAATGATCTCAAAAATGGCCGGTGGCATCGGCCT--CAACATCCATCGCATTCGTGCCA 50635
Query 260091 CGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCG 260150
| ||| | || | ||||| || ||||| |||||||||| || | ||||||||||| |
Sbjct 50636 CAGGCTCATATATTGCGGGGACAAACGGAACGTCCAACGGCATTATTCCCATGCTTCGTG 50695
Query 260151 TTTTTAACGACACGGCGCGCTACGTCGACCA 260181
| || ||| |||| || | ||||| |||||
Sbjct 50696 TCTTCAACAACACAGCCAGGTACGTTGACCA 50726
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177726418834398
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |