Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01- 04] 879 sequences; 40,986,545 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq44 150 3e-30 seq684 120 4e-21 seq802 118 2e-20 >seq44 Length=30807 Score = 150 bits (166), Expect = 3e-30 Identities = 196/266 (74%), Gaps = 4/266 (2%) Strand=Plus/Minus Query 1456516 CAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCC 1456575 |||| | |||||| ||| |||||| |||||||| | ||||| ||| ||| | || || Sbjct 22424 CAAGGATATCATCACCGATGCCGTCAAGATCGAGCAGGAGTTCCTCACGGAGGCCCTCCC 22365 Query 1456576 GGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCC 1456635 || || ||||||||||||| | | |||||| ||||||||||| || |||||| Sbjct 22364 CTGTGCCCTGCTCGGCATGAACGCGAAC-CTCATGAAGCAGTACATTGAGTTC-GTCGCC 22307 Query 1456636 GACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCC 1456695 ||| | ||||||| || |||||| || ||||| |||| || | ||||||| ||| Sbjct 22306 GACAGGCTGCTCGTCGCCCTCGGCAACG-AGAAGATCTACAGGTCCACCAACCCCTTCGA 22248 Query 1456696 ATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGA 1456754 | |||||| ||||| |||| |||||||||||||| |||||| || | ||| || Sbjct 22247 CTTCATGGAGAACATCTCCCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGA 22188 Query 1456755 GTACGCCAAGGCCGGCGTCACCGCCA 1456780 ||| ||||||||||||| |||| Sbjct 22187 CTACCAGAAGGCCGGCGTCATGGCCA 22162 Score = 150 bits (166), Expect = 3e-30 Identities = 247/348 (71%), Gaps = 16/348 (5%) Strand=Plus/Minus Query 1455767 TACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGA 1455826 ||||| | ||| ||| |||||||| || |||||||||||||| || |||||||| ||||| Sbjct 23109 TACCA-CAGATCTGGCAAATGTAC-AAGAAGGCCGAGGCCTCTTTCTGGACCGCTGAGGA 23052 Query 1455827 GGTCGACCTCGGCGCCGA----CACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGC 1455879 | |||| || | || |||| ||||| ||| | || |||||| Sbjct 23051 GATCGATCTTTCCAAGGATCTCCACG----ACTGGAACAACAAGCTCAATGATGACGAGA 22996 Query 1455880 GCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAG 1455939 ||||| || ||| | |||||||| || ||||||| ||| || || || |||| Sbjct 22995 AGTATTTCGTCTCTCACATTCTCGCCTTCTT-CGCCGCCTCCGACGGTATTGTCAACGAG 22937 Query 1455940 AACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGG 1455999 ||||| | | || || | |||||||| | || ||||| || | || ||||| Sbjct 22936 AACCTCGTTGAGCGATTCAGCGCCGAGGTCCAGATTCCCGAGGCCCGCTGCTTCTACGGT 22877 Query 1456000 TTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTAC 1456059 ||||||||| || || ||||||||||| || |||||||| ||||| || ||||||||| Sbjct 22876 TTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCTCCTCATTGACACCTAC 22817 Query 1456060 GTCAAGGACCCGGTCGAGAAGGAC-CACCTCTTTCGCGCCATCGACAC 1456106 ||||||| || | | || ||||| |||||||| |||||| || || Sbjct 22816 ATCAAGGAGCCCGCCCAG-AGGACTCACCTCTTCAACGCCATTGATAC 22770 >seq684 Length=110469 Score = 120 bits (132), Expect = 4e-21 Identities = 249/371 (67%), Gaps = 0/371 (0%) Strand=Plus/Minus Query 332876 CGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTGCAGGCC 332935 || || || || || ||| || |||| |||||||| | | ||| |||||| || Sbjct 28745 CGAAGAATAGCGCAGCGGGATTGGAGGGGCTCGATGATCTTGTTGGACTGGTTGCACGCG 28686 Query 332936 AGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGGGCC 332995 | ||| || ||||| || |||| | |||||||||| |||||||| ||||| || Sbjct 28685 AAGGCGAATCGCGTGGTGTTGGAGTAGATTTCCATGGTTCGGCGGAGGGCTTGTTGCGCG 28626 Query 332996 GCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGGCAGA 333055 | | ||| | || |||||| ||||| ||||||| || ||||||||| ||| | || || Sbjct 28625 CCTGACGTCATGCTGTCGGCTTCGTCAAGGATGACGAGCTTGTGGCGGCCGGGGGGAAGG 28566 Query 333056 TCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCACGACGTCCACGCCGCGCTCG 333115 || | || |||| | ||||| || ||||||||||| | ||| | ||| Sbjct 28565 GTGACTTTCTTTTGGGCGAAGCCCTTGATTCGGTTTCGCACGACGTCGATGCCTCTTTCG 28506 Query 333116 TCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGCGGCCGCACCCAAGAGGACGCGCGCC 333175 || ||||||||||| || |||||||| | ||| | || | | ||||| Sbjct 28505 TCGCTGGCGTTGAGTTCTAGTACGGCCTCCTTATAGGCGTCTCCAAGTAATTGCCGCGCG 28446 Query 333176 AGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGCGGACCCGCCAGCAAGAGGTTGGGC 333235 || || |||||| || || ||||| | || ||| || | | | || || |||| Sbjct 28445 AGACAGTGGATGCTTGTCGTTTTGCCGATACCTGGCATTCCGGAGATGATGACGTGGGGC 28386 Query 333236 ATGTTGCCGTC 333246 |||||||| || Sbjct 28385 ATGTTGCCTTC 28375 >seq802 Length=124424 Score = 118 bits (130), Expect = 2e-20 Identities = 264/391 (68%), Gaps = 19/391 (5%) Strand=Plus/Plus Query 259793 GTCGAGCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGAC 259852 |||||||| || ||| | ||| ||||||||||||| |||| ||| ||| | ||| Sbjct 50353 GTCGAGCGACCTCAGCACATGATCATGCGTGTCGCTGTTGGT-ATTTGGGGC--GATGAC 50409 Query 259853 GTCGACAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTGTTC 259912 || || || | | ||| |||| | | ||| |||||| | || ||| Sbjct 50410 GTTGAGCGTGTGATTGAG-ACGTACA----ATCTA-------ATGTCGTCCAAATTCTTC 50457 Query 259913 ACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGC 259972 ||| || | ||||| |||||||| |||||||| || | | ||| || |||||| Sbjct 50458 ACCCATGCTTCACCCACTCTCTTTAACGCCGGCACACCCCAAGCCCAGTTGTCCTCGTGC 50517 Query 259973 TTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGC 260032 || || | |||||||||| || || ||||| || |||||||| | ||| ||| Sbjct 50518 TTCCTCGTCGACATGAAGGATGACAGTATTGAGGGAATTTATGACACATTGAAGACATGC 50577 Query 260033 GCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGG--TGCGCGCCG 260090 || | ||||| || |||||| |||||||| | | || || | | || ||| Sbjct 50578 GCAATGATCTCAAAAATGGCCGGTGGCATCGGCCT--CAACATCCATCGCATTCGTGCCA 50635 Query 260091 CGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCG 260150 | ||| | || | ||||| || ||||| |||||||||| || | ||||||||||| | Sbjct 50636 CAGGCTCATATATTGCGGGGACAAACGGAACGTCCAACGGCATTATTCCCATGCTTCGTG 50695 Query 260151 TTTTTAACGACACGGCGCGCTACGTCGACCA 260181 | || ||| |||| || | ||||| ||||| Sbjct 50696 TCTTCAACAACACAGCCAGGTACGTTGACCA 50726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177726418834398