Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01-
04] 879 sequences; 40,986,545 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq794 174 5e-38
seq616 109 2e-18
>seq794
Length=142894
Score = 174 bits (192), Expect = 5e-38
Identities = 177/231 (77%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || || ||||| || ||||| || ||||| || |||||
Sbjct 83889 CATACCACCACGAAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATC 83830
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
||| | || || |||||||| || || || ||||||||||| |||||||| ||||| ||
Sbjct 83829 AGAGAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATGAGACGTTGTTGATCGGG 83770
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||| || || || ||||||||||| || | || || || || || | ||| |||| |||
Sbjct 83769 AGGGATGCCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTATCCGATGATTC 83710
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|||||| || |||| ||||| || || || || || || || ||||||||
Sbjct 83709 AACTTCGAGGGTAATCGTCTTGCCAGTAAGAGTCTTCACGAAGATCTGCAT 83659
Score = 131 bits (144), Expect = 5e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | |||||||| ||||| || || || || |||||||| |||||
Sbjct 83352 CATACCACCACGAAGGCGGAGAACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATC 83293
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
||| | ||||| || || ||||| || || ||||| || || || || ||||| || ||
Sbjct 83292 AGAAAGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCGGG 83233
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||||| || || || ||||| || || | || ||||| || || | |||||| | ||
Sbjct 83232 GGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTATCAGAGGACTC 83173
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTT 140721
|| || || || | ||||| ||||| | | |||
Sbjct 83172 GACCTCGAGGGTGATGGTCTTGCCGGTGACTATTT 83138
Score = 116 bits (128), Expect = 1e-20
Identities = 157/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || ||||| || || ||||| || || ||||| || ||
Sbjct 83661 CATACCACCACGGAGACGGAGGACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTC 83602
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || ||||| ||||| || || || || || || | ||||| || |||||
Sbjct 83601 GGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGG 83542
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|||||| || || || |||||||| || | || ||||| || || | || || | ||
Sbjct 83541 AGGAATACCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTC 83482
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725
||| || || || | ||||| ||||| || || || ||
Sbjct 83481 AACCTCGAGGGTGATGGTCTTGCCGGTAAGAGTCTTGAC 83443
>seq616
Length=427541
Score = 109 bits (120), Expect = 2e-18
Identities = 108/139 (78%), Gaps = 3/139 (2%)
Strand=Plus/Plus
Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517
||||||||||| |||||| ||| || || | ||||||||||| ||||| || ||
Sbjct 127741 CGTGGCACACCCAATGTAACGTTC---TTGGACGATACACCAGCAAAATGGAATGTGTTG 127797
Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577
||||| | ||||| | ||||||||||| ||||||||||| | ||| |||||||||||
Sbjct 127798 AGAGTCATCTGAGTGGCAGGCTCACCAATGGACTGCGCTGCCAAAACACCAACCATTTCG 127857
Query 377578 CCAGGATTGACAATAGCCT 377596
||||| || || | ||||
Sbjct 127858 CCAGGGTTCACGAATGCCT 127876
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515237334920837
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |