Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01- 04] 879 sequences; 40,986,545 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq794 174 5e-38 seq616 109 2e-18 >seq794 Length=142894 Score = 174 bits (192), Expect = 5e-38 Identities = 177/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || ||||| || ||||| || ||||| || ||||| Sbjct 83889 CATACCACCACGAAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATC 83830 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || |||||||| || || || ||||||||||| |||||||| ||||| || Sbjct 83829 AGAGAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATGAGACGTTGTTGATCGGG 83770 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || ||||||||||| || | || || || || || | ||| |||| ||| Sbjct 83769 AGGGATGCCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTATCCGATGATTC 83710 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||| || |||| ||||| || || || || || || || |||||||| Sbjct 83709 AACTTCGAGGGTAATCGTCTTGCCAGTAAGAGTCTTCACGAAGATCTGCAT 83659 Score = 131 bits (144), Expect = 5e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | |||||||| ||||| || || || || |||||||| ||||| Sbjct 83352 CATACCACCACGAAGGCGGAGAACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATC 83293 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | ||||| || || ||||| || || ||||| || || || || ||||| || || Sbjct 83292 AGAAAGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCGGG 83233 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || || || ||||| || || | || ||||| || || | |||||| | || Sbjct 83232 GGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTATCAGAGGACTC 83173 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTT 140721 || || || || | ||||| ||||| | | ||| Sbjct 83172 GACCTCGAGGGTGATGGTCTTGCCGGTGACTATTT 83138 Score = 116 bits (128), Expect = 1e-20 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || ||||| || || ||||| || || ||||| || || Sbjct 83661 CATACCACCACGGAGACGGAGGACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTC 83602 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| ||||| || || || || || || | ||||| || ||||| Sbjct 83601 GGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGG 83542 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || || |||||||| || | || ||||| || || | || || | || Sbjct 83541 AGGAATACCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTC 83482 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 ||| || || || | ||||| ||||| || || || || Sbjct 83481 AACCTCGAGGGTGATGGTCTTGCCGGTAAGAGTCTTGAC 83443 >seq616 Length=427541 Score = 109 bits (120), Expect = 2e-18 Identities = 108/139 (78%), Gaps = 3/139 (2%) Strand=Plus/Plus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 ||||||||||| |||||| ||| || || | ||||||||||| ||||| || || Sbjct 127741 CGTGGCACACCCAATGTAACGTTC---TTGGACGATACACCAGCAAAATGGAATGTGTTG 127797 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 ||||| | ||||| | ||||||||||| ||||||||||| | ||| ||||||||||| Sbjct 127798 AGAGTCATCTGAGTGGCAGGCTCACCAATGGACTGCGCTGCCAAAACACCAACCATTTCG 127857 Query 377578 CCAGGATTGACAATAGCCT 377596 ||||| || || | |||| Sbjct 127858 CCAGGGTTCACGAATGCCT 127876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515237334920837