Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01- 04] 879 sequences; 40,986,545 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq794 179 9e-40 seq404 167 5e-36 seq754 152 1e-31 >seq794 Length=142894 Score = 179 bits (198), Expect = 9e-40 Identities = 173/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| |||||||| |||||||| || || ||||| ||||| | ||||| Sbjct 83880 ACGAAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGGGT 83821 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||||||||||||||| || || ||||| || |||||||| || ||||| | || Sbjct 83820 GCGGCCATCTTCCAGCTGCTTACCAGCAAAGATGAGACGTTGTTGATCGGGAGGGATGCC 83761 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||| ||||| ||||| || ||||| |||||||| || || |||||| ||||| Sbjct 83760 CTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTATCCGATGATTCAACTTCGAG 83701 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||| || || |||||||| || || | |||||| Sbjct 83700 GGTAATCGTCTTGCCAGTAAGAGTCTTCACGAAGATCTGCAT 83659 Score = 163 bits (180), Expect = 7e-35 Identities = 156/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || || || |||||||| || ||||| || || || | ||||| | ||||| Sbjct 83642 AGGACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCC 83583 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| ||||| || | ||||||||||||||||||| || ||||||||| Sbjct 83582 TCAAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCC 83523 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || ||||||||||| || ||||||||||| ||||| ||| Sbjct 83522 TGAATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCAACCTCGAGGGTGATGGTC 83463 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 || || || |||||||| || Sbjct 83462 TTGCCGGTAAGAGTCTTGAC 83443 Score = 158 bits (174), Expect = 3e-33 Identities = 155/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || ||||||||||| ||||| || || || || || ||||| | |||||| Sbjct 83343 ACGAAGGCGGAGAACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGAAAGGGT 83284 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || || ||||||||||| ||||| || ||||| || ||||| || |||| || Sbjct 83283 TCGGCCGTCCTCAAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCGGGGGGAATGCC 83224 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||||| || || || |||||||| |||||| || |||||||| Sbjct 83223 CTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTATCAGAGGACTCGACCTCGAG 83164 Query 211073 AGTGATCGTCTTTCCCGTGA 211092 ||||| ||||| || |||| Sbjct 83163 GGTGATGGTCTTGCCGGTGA 83144 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| || || || |||||||| || ||||| || ||||| | ||| || Sbjct 84108 ACGAAGGCGGAGGACGAGATGGAGCGTGGACTCCTTCTGGATATTGTAATCAGAAAGAGT 84049 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || || ||||||||||| ||||| || || || || || || || |||| ||| Sbjct 84048 ACGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCGGGGGGAATTCC 83989 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||| ||||| ||||| || |||||||| || || ||||| ||||| Sbjct 83988 CTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCCGAAGACTCAACTTCGAG 83929 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| || || || ||||| ||||| | |||||| Sbjct 83928 CGTAATAGTCTTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 83887 >seq404 Length=95643 Score = 167 bits (184), Expect = 5e-36 Identities = 172/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| ||||| || |||||||| || |||||||| || || | ||||| Sbjct 37249 ACGAAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGT 37308 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || || ||||||||||| |||||||| ||||| |||||||| || || | || Sbjct 37309 GCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGGATGCC 37368 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||||| || || || ||||| ||||| ||| || ||||| || Sbjct 37369 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCAAG 37428 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| ||||| ||||| || ||||| || || | ||||| || Sbjct 37429 GGTGATGGTCTTGCCCGTTAGGGTCTTGACGAAGATTTGCATGTT 37473 >seq754 Length=106820 Score = 152 bits (168), Expect = 1e-31 Identities = 141/179 (79%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || || || || ||||| | |||||| | ||||| || |||||||| || ||||||||| Sbjct 63406 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATA 63465 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 || || ||||| || ||||| | ||| ||||||||||||||||| ||||| || ||| Sbjct 63466 AGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCG 63525 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 || ||||| ||| || ||||| || ||||| ||||| |||||||| ||||| ||||| Sbjct 63526 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACAAA 63584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159138945412835