Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01- 04] 879 sequences; 40,986,545 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq794 98.7 9e-16 seq404 86.0 5e-12 >seq794 Length=142894 Score = 98.7 bits (108), Expect = 9e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||| |||||| ||| || || ||||| ||||| | ||| || || |||| |||||||| Sbjct 84090 ATGGAGCGTGGACTCCTTCTGGATATTGTAATCAGAAAGAGTACGGCCGTCCTCAAGCTG 84031 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 ||||| || || || ||||||||||| |||| ||| | | ||| |||||| || || Sbjct 84030 CTTGCCGGCGAAAATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCCTGAATCTT 83971 Query 39201 CTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 | || | | | | ||||| ||||| || || | ||| ||| | || || || Sbjct 83970 CGACTTCACATTGTCGATGGTATCCGAAGACTCAACTTCGAGCGTAATAGTCTTGCCGGT 83911 Query 39261 CAGCGTTTTAACAAAGATTTGCAT 39284 || || || |||||||| ||||| Sbjct 83910 AAGGGTCTTGACAAAGATCTGCAT 83887 Score = 87.8 bits (96), Expect = 2e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || || || ||||| ||||| | ||| ||||| |||| |||||||| ||||| || || Sbjct 83312 TCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCGAAA 83253 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 || || ||||||||||||| ||| | || ||| |||||| ||| ||| Sbjct 83252 ATCAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTC 83205 >seq404 Length=95643 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || |||| || || || |||| || ||||| Sbjct 37268 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGC 37327 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||| ||||||| ||| | || ||| |||||| ||| || Sbjct 37328 TTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTG 37387 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 |||| | | | ||| || ||||| || || | ||||| | || ||||| Sbjct 37388 GACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTT 37447 Query 39262 AGCGTTTTAACAAAGATTTGCATCTTT 39288 || || || || ||||||||||| ||| Sbjct 37448 AGGGTCTTGACGAAGATTTGCATGTTT 37474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429540998358527