Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01-
04] 879 sequences; 40,986,545 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq794 98.7 9e-16
seq404 86.0 5e-12
>seq794
Length=142894
Score = 98.7 bits (108), Expect = 9e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140
||| |||||| ||| || || ||||| ||||| | ||| || || |||| ||||||||
Sbjct 84090 ATGGAGCGTGGACTCCTTCTGGATATTGTAATCAGAAAGAGTACGGCCGTCCTCAAGCTG 84031
Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200
||||| || || || ||||||||||| |||| ||| | | ||| |||||| || ||
Sbjct 84030 CTTGCCGGCGAAAATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCCTGAATCTT 83971
Query 39201 CTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260
| || | | | | ||||| ||||| || || | ||| ||| | || || ||
Sbjct 83970 CGACTTCACATTGTCGATGGTATCCGAAGACTCAACTTCGAGCGTAATAGTCTTGCCGGT 83911
Query 39261 CAGCGTTTTAACAAAGATTTGCAT 39284
|| || || |||||||| |||||
Sbjct 83910 AAGGGTCTTGACAAAGATCTGCAT 83887
Score = 87.8 bits (96), Expect = 2e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153
|| || || ||||| ||||| | ||| ||||| |||| |||||||| ||||| || ||
Sbjct 83312 TCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCGAAA 83253
Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201
|| || ||||||||||||| ||| | || ||| |||||| ||| |||
Sbjct 83252 ATCAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTC 83205
>seq404
Length=95643
Score = 86.0 bits (94), Expect = 5e-12
Identities = 143/207 (69%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141
|| || ||| ||| || || || || || |||| || || || |||| || |||||
Sbjct 37268 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGC 37327
Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201
||||| || || || || ||||| ||||||| ||| | || ||| |||||| ||| ||
Sbjct 37328 TTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTG 37387
Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261
|||| | | | ||| || ||||| || || | ||||| | || |||||
Sbjct 37388 GACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTT 37447
Query 39262 AGCGTTTTAACAAAGATTTGCATCTTT 39288
|| || || || ||||||||||| |||
Sbjct 37448 AGGGTCTTGACGAAGATTTGCATGTTT 37474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429540998358527
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |