Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01- 04] 879 sequences; 40,986,545 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq794 138 3e-27 seq754 132 1e-25 seq404 132 1e-25 >seq794 Length=142894 Score = 138 bits (152), Expect = 3e-27 Identities = 150/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || ||||| || || || || |||||||||||||| || || |||||||||| Sbjct 83441 TCGTCAAGACTCTTACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCCGACACCATCG 83500 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | || ||||| |||||||||||||| || || || ||||| ||||| |||||| | | Sbjct 83501 ACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCAACAACGATTGA 83560 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 | |||||||| || ||||| || ||||| | || || |||| || || |||| || | Sbjct 83561 TTTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAATATCCAGAAGG 83620 Query 178111 AATCAACACTGCATCTTGT 178129 | || || || ||||| || Sbjct 83621 AGTCCACGCTCCATCTGGT 83639 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| ||||| || || || ||||| |||||||| || ||| || || Sbjct 83662 CAGATCTTCGTGAAGACTCTTACTGGCAAGACGATTACCCTCGAAGTTGAATCATCGGAT 83721 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||||||||| || || || |||||||| || || ||| Sbjct 83722 ACCATCGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGCATCCCTCCCGATCAACAA 83781 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || ||||| |||||||| | || || | ||||| ||| | Sbjct 83782 CGTCTCATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACCCTCTCTGATTACAACATT 83841 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 83842 CAGAAGGAGTCCACCCTTCACCTCGT 83867 Score = 118 bits (130), Expect = 3e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || || || |||||||||||||| || ||| || |||||||| || ||||| Sbjct 83144 TCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGATACCATCGACAATGTCAAGT 83203 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 ||||| |||||||| || || || || || |||||||| || || || ||||| || | Sbjct 83204 CGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGCCTGATTTTCGCTGGCA 83263 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | ||||| || || || | || ||| | ||||| || | || || ||||| || || | Sbjct 83264 AGCAGCTTGAGGACGGCCGAACCCTTTCTGATTACAATATTCAGAAGGAATCCACCCTTC 83323 Query 178123 ATCTTGTT 178130 | |||||| Sbjct 83324 ACCTTGTT 83331 Score = 111 bits (122), Expect = 4e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || || || || || || || || ||||| || || || || Sbjct 83890 CAGATCTTTGTCAAGACCCTTACCGGCAAGACTATTACGCTCGAAGTTGAGTCTTCGGAT 83949 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || |||||||||||||| || ||||| || || || ||||| Sbjct 83950 ACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGAATTCCCCCCGATCAGCAG 84009 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || |||||||| || ||||| || || || | |||||| | ||||| || || Sbjct 84010 CGTCTCATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGTACTCTTTCTGATTACAATATC 84069 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| || Sbjct 84070 CAGAAGGAGTCCACGCTCCATCTCGT 84095 >seq754 Length=106820 Score = 132 bits (146), Expect = 1e-25 Identities = 132/171 (77%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 ||| || || || ||||| || || || |||||||| ||||| || ||| ||||| || Sbjct 63585 TTTTGTCAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGAT 63526 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 ||| || || || ||||| |||||||| || ||||||||||| || || || || || Sbjct 63525 CGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGATCAACAGCGTCT 63466 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAA 178099 ||||||||||||||| |||||||| ||||| | || ||| | ||||| || Sbjct 63465 TATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGATTACAA 63415 >seq404 Length=95643 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || || || || || || |||||||| ||||| || ||| ||| Sbjct 37467 CAAATCTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGAC 37408 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||| |||||||| || || ||||| || ||||| || Sbjct 37407 ACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAACAG 37348 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| || || | || || |||| || ||| || Sbjct 37347 CGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATC 37288 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 37287 CAGAAGGAGTCCACCCTCCACCTCGT 37262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203717643353526