Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20pullulans_20[genbank_20GCA_5F001931805.1_202017-01- 04] 879 sequences; 40,986,545 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq404 165 8e-36 seq794 136 4e-27 seq754 98.7 9e-16 >seq404 Length=95643 Score = 165 bits (182), Expect = 8e-36 Identities = 177/232 (76%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || ||| ||||||||| ||||| ||||||||| Sbjct 37244 CCACCACGAAGACGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 37303 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| |||||||||||||||||||| ||||||||||||||||| | ||| Sbjct 37304 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGG 37363 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| || ||| || | || | ||||| ||||| | Sbjct 37364 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATCGTGTCCGAGGACTCGA 37421 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||| | || || || || ||||| || ||||| ||||| || |||||||| Sbjct 37422 CCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACGAAGATTTGCATGTT 37473 >seq794 Length=142894 Score = 136 bits (150), Expect = 4e-27 Identities = 165/220 (75%), Gaps = 6/220 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||||||| |||||| ||||||||| || || ||||||||| Sbjct 83657 CCACCACGGAGACGGAGGACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCGGAG 83598 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || ||||||||||||||||| |||| || |||||||| | ||| Sbjct 83597 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGA 83538 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTCC 41812 | | |||||||||| ||| | || | ||| || | || | |||||| |||||| Sbjct 83537 ATACCCTCCTTGTCC-TGAATCTTCGACTTGACATTGTCG--ATGGTGTCGGACGACTCA 83481 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 ||||| | || || || || || || || ||||| |||| Sbjct 83480 ACCTCGAGGGTGATGGTCTTGCCGGTAAGAGTCTTGACGA 83441 Score = 107 bits (118), Expect = 2e-18 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | || ||||| |||||| ||||||||| || || || || || Sbjct 84114 GCCACCACGAAGGCGGAGGACGAGATGGAGCGTGGACTCCTTCTGGATATTGTAATCAGA 84055 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || || || |||| || ||||||||||||||||| || || ||||| || || | ||| Sbjct 84054 AAGAGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCGGGGGG 83995 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 || | |||||||||| ||| | || | |||| || | | | || || ||||| Sbjct 83994 AATTCCCTCCTTGTCC-TGAATCTTCGACTTC-ACATTGTCGATGGTATCCGAAGACTCA 83937 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || | ||| || || || || || || ||||| || || |||||||| Sbjct 83936 ACTTCGAGCGTAATAGTCTTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 83887 Score = 105 bits (116), Expect = 6e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || || || || ||| ||||||||||| || || || || Sbjct 83348 CCACCACGAAGGCGGAGAACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGAA 83289 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| || ||||||||||| ||||| ||||||||||| ||||| | |||| Sbjct 83288 AGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCGGGGGGA 83229 Query 41756 ACGCTCTCCTTGTCCATGATTTT 41778 | || |||||||||| ||| || Sbjct 83228 ATGCCCTCCTTGTCCTGGATCTT 83206 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || ||| ||||||||||||||| || || ||| Sbjct 83885 CCACCACGAAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAG 83826 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || |||||||| || || || || || || ||||| || | || Sbjct 83825 AGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATGAGACGTTGTTGATCGGGAGGG 83766 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||| ||| ||| | || | | ||| | | | || || || || || Sbjct 83765 ATGCCCTCCTTATCC-TGAATCTTGGACTTGACGTTGTCGATGGTATCCGATGATTCAAC 83707 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || ||||| || || || || ||||| ||||| |||||||| Sbjct 83706 TTCGAGGGTAATCGTCTTGCCAGTAAGAGTCTTCACGAAGATCTGCAT 83659 >seq754 Length=106820 Score = 98.7 bits (108), Expect = 9e-16 Identities = 133/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 |||||||||| || || || || |||||||| | || ||||||||||| |||||||| | Sbjct 63404 CCTTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 63463 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 | || |||||||| || | || | | |||||||||| ||| || |||| || | Sbjct 63464 TAAGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGGATCTTGGACTTC-ACATTG 63522 Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | | ||||| ||||| ||||| | || || || |||||||| || ||||| || Sbjct 63523 TCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACA 63582 Query 41852 AAA 41854 ||| Sbjct 63583 AAA 63585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462298920434800