Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq24 132 1e-25 seq161 104 5e-17 seq74 91.5 3e-13 >seq24 Length=268411 Score = 132 bits (146), Expect = 1e-25 Identities = 255/371 (69%), Gaps = 10/371 (3%) Strand=Plus/Minus Query 282393 ACGATAGGTGTGATGAACTTCTTCAAGAAACCTGGAATTTCTAGGAGACTGGGAAAACAG 282452 ||||||||||||||||| | | || ||| || |||| | || | ||||||||| | Sbjct 192729 ACGATAGGTGTGATGAATTCCAGCAGGAACCCAGGAAGCTTAAGCAAACTGGGAAACTGG 192670 Query 282453 CTATGGAAAAAGTTCATGACAAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTC 282512 || || ||||| || | |||||| || ||| |||| || |||| |||||| Sbjct 192669 ACTTGCAAGAAGTTGATCAAAAGACCCTTGATATGACTTCCATCGTGATCCTGATCGGTC 192610 Query 282513 ATGATCATCACATGACCGTATCTCAGAGAAGAAGTGTCTTTGTACACTTTACCGGTTTGA 282572 |||||||||| ||| ||||| | ||| || ||| ||||| | || | ||| Sbjct 192609 ATGATCATCAGATGGCCGTAGCGAAGACCCTTGGTATCTGTGTACTCCTTCTTGTGTTGC 192550 Query 282573 AGGCCCAAAATTTGTTTGA-GCGCGGTGATTTCTTCGTTCTTTGTGATACTTGCCACAGA 282631 || |||| || || |||| | | | |||||| ||||||| | || | || || Sbjct 192549 AGTCCCATAAACTGCTTGATGTTCTG-AATTTCTGCGTTCTTCGAAATCTGATCGACTGA 192491 Query 282632 TGCATCGCGAACGTTCAGCAACTTACCGCGGAGAGGAAAAACAC----CATATCTCTCGC 282687 ||| ||||||||||||| || |||||| || ||||| || |||| || ||| || | Sbjct 192490 TGCGTCGCGAACGTTCAACATCTTACCACGCAGAGGGAAGACACCGAACAGATC-CTGGT 192432 Query 282688 GACCGACCACGGACAGTCCTGCAATTGCAAGTGTTGCTGCGGAATCTCCCTCCGTCAAGA 282747 | || || | |||| |||| ||| || | || || || || || || ||||||| Sbjct 192431 TA---ACAACAGCTCGTCCAGCAAGTGCGAGCATAGCAGCCGAGTCACCTTCTGTCAAGA 192375 Query 282748 TGAGAGTACAC 282758 ||||||||||| Sbjct 192374 TGAGAGTACAC 192364 >seq161 Length=251022 Score = 104 bits (114), Expect = 5e-17 Identities = 179/257 (70%), Gaps = 6/257 (2%) Strand=Plus/Minus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445 ||||| || || || || | | ||| | |||||| | | || ||| |||| ||| Sbjct 93074 ATCATCACCGAGGCTGTCGCTATCGAGCAAGAGTTCTTGTCAGATGCTCTTCCCTGTGCT 93015 Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 ||| | ||||||||||| | || ||| | || |||||||| || || || |||||| | Sbjct 93014 CTTCTCGGCATGAACGCCAAGCTCATGTGTCAATACATCGAGTTTGTCGCTGACCGCCTG 92955 Query 230506 TTTGTTGCACTTGGTTACGAGA--AAG-TGTACAACTCTAAGAACCCCTTTGCATTTATG 230562 | | || || || |||| ||| | ||| | | | |||||||| | || ||| Sbjct 92954 CTCCTCGCTCTCGG---CGAGCCCAAGATCTACCAAGCCACCAACCCCTTCGACTTCATG 92898 Query 230563 GAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAG 230622 ||| ||| ||| | || ||||||||||||||||| ||| | || ||||||| ||| Sbjct 92897 GAGAACATCTCGTTGGCTGGCAAGACCAACTTCTTCGAGAAGAGAGTTGGTGACTACCAG 92838 Query 230623 AGGCCTGGTGTGATGAA 230639 | | ||||||| ||||| Sbjct 92837 AAGGCTGGTGTCATGAA 92821 >seq74 Length=485481 Score = 91.5 bits (100), Expect = 3e-13 Identities = 189/281 (67%), Gaps = 3/281 (1%) Strand=Plus/Minus Query 319389 TTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTT 319448 |||||| || ||| || || ||| || || |||||||| || ||||| || Sbjct 114547 TTCGGGCTTCTGCTTGACAAAGGCGGCAAGGTTACCCTTGTAGTTGACAAGCTTC---TT 114491 Query 319449 AGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACAC 319508 | ||||| ||||| || ||||| ||| |||||||||| || |||||||| || || Sbjct 114490 GGTCTCGTAGTGGATGATGTCAGTGCAGACATCGTCGAGGAAACCAGAGTCGTGAGAGAC 114431 Query 319509 AATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGA 319568 ||||| | | | ||| | | | | ||||| || | ||| || ||||| | Sbjct 114430 AATCAGCGAGGTGATGTCAGTGTGAGTTCTGAGGTACTCCTGGAGCCATCTGACGTTGGC 114371 Query 319569 CACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGC 319628 ||| |||||||||||| || ||||| ||||| | | | ||| || | ||| || Sbjct 114370 AACATCAAGATGGTTGGTAGGTTCGTCGAGAAGGAAGACGTCGGCGCGCATCAACATGGC 114311 Query 319629 ACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCGGAAAGAG 319669 | || | |||||| ||||| ||||| || || || |||| Sbjct 114310 TCTGGCCAAAGCGAGCTTCATCTTCCAACCACCAGACAGAG 114270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057821736587210