Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq161 158 1e-33 >seq161 Length=251022 Score = 158 bits (174), Expect = 1e-33 Identities = 569/879 (65%), Gaps = 11/879 (1%) Strand=Plus/Plus Query 16644 TGTTATCTTGTTTATGAACAACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAA 16703 |||| | |||| |||| || || || |||| |||| || | ||| | || ||||| | Sbjct 92811 TGTTGTGCTGTTCATGA-CACCAGCC-TTCT--GGTAGTCACCAACTCTCTTCTCGAAGA 92866 Query 16704 AGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAAGGATTAGTAGCTGAAA 16763 |||| || ||||| | | || || ||||||||||| || || || || || ||| Sbjct 92867 AGTTGGTCTTGCCAGCCAACGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCTTGGT 92926 Query 16764 ATATTTTAGAGTACCCCAGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGC 16823 | || || | | || || || || | | || || ||||| || || ||||| | Sbjct 92927 AGATCTTGGGCTCGCCGAGAGCGAGGAGCAGGCGGTCAGCGACAAACTCGATGTATTGAC 92986 Query 16824 ACATTAATTCGCAGTTCATTCCTATAAGACGTACCGG-AAGAGCTTCCGTCAAAAATCGT 16882 |||| | | | |||||| || | |||| | || || |||||| || | ||| || | Sbjct 92987 ACATGAGCTTGGCGTTCATGCCGAGAAGA-GCACAGGGAAGAGCATCTGACAAGAACTCT 93045 Query 16883 TGCTCTATAACAACCGCTTCCTTAATAATACTAGCA-ACTCGTTCCTCGGACGGTGTATG 16941 ||||| ||| | || || || | || || || || || | | | || || | | Sbjct 93046 TGCTCGATAGCGACAGCCTCGGTGATGAT-CTCGCGGACGAGAGCAGCAGAGGGCTTGTT 93104 Query 16942 TTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGAT 17001 || || || | || || ||||| ||| || | ||||| || | ||| Sbjct 93105 CTTGAGGTGAGAGTGGAGGAGGCAGGCGAAGTCGGTGTGCATACCCTCATCACGAGAGAT 93164 Query 17002 AAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGC 17061 || ||||| || || || | |||||||| || || ||||| | ||| || || | Sbjct 93165 GAGCTCGTTGGAGAAGGTAAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGA 93224 Query 17062 GGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGC 17121 ||||| || ||||| ||||| ||||||||||||| || || || || || || | | Sbjct 93225 AGCGAAGGAGCCAGAGAAGAAGATACCCTCGACGGCGGCGAAAGCAATCAAGCGGCAGCC 93284 Query 17122 GTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCA 17181 | |||| ||| |||| | ||||| || | |||| ||||| ||| ||| ||||| Sbjct 93285 AAATGTCGAGTCCTTGTCGCAGATCCACTTGAGGGCCCAGTCGGCCTTTCTCTTGATGCA 93344 Query 17182 ATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGT 17241 | || | || ||||| || || | | || || | ||| | || || || Sbjct 93345 AGGAATGTTGTCGATGGCGTTGAAGAGGTAGGTACGTTGCTTGGGCTCGCTAATGTATGT 93404 Query 17242 ATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTA 17301 |||||||| | ||| | |||||||| ||||||||||| || || || ||||| Sbjct 93405 GTCGATGAGCAATGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATTTGGAAACCGTA 93464 Query 17302 AAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTT 17361 || |||| ||| || | || ||||| || | ||| || || | || || ||||| Sbjct 93465 GAAACATCTGGCCTCGGGGATCTGAACCTCAGAGCTGAAACGCTCGACAAGGTTCTCGTT 93524 Query 17362 CACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTC 17421 ||||| ||||| || ||||| || || | | || ||||| || ||||| Sbjct 93525 GACGATACCGTCAGAGGCAGCGAAGAAGGCGAGGACGTGAGAGATGAAGAATCGCTCGTC 93584 Query 17422 --CGGTG-TAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGT 17478 || || | | | |||||| | | ||| ||||| | ||| | || |||| ||| Sbjct 93585 GTCGTTGAGACGTCTGTTCCAGTCGTGAAGATCCTTGGAGAGATCAATCTCCTCGGCGGT 93644 Query 17479 CCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517 ||| ||| || | ||||| || ||||| |||||||| Sbjct 93645 CCAGAAAGAGGCTTCGGCCTTCTTGTACATGTTCCAAAT 93683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517544519623560