Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016-
12-23] 167 sequences; 28,173,731 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq161 336 2e-87
seq21 129 6e-25
seq26 125 7e-24
seq24 102 8e-17
>seq161
Length=251022
Score = 336 bits (372), Expect = 2e-87
Identities = 568/812 (70%), Gaps = 23/812 (3%)
Strand=Plus/Minus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| ||| ||||||||| |||||||| || || |||||||||| ||||||| | || ||
Sbjct 93683 ATTTGGAACATGTACAAGAAGGCCGAAGCCTCTTTCTGGACCGCCGAGGAGATTGATCTC 93624
Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
|||||||| ||||||| | || | |||||| ||||||| ||||||
Sbjct 93623 TCCAAGGATCTTCACGACTGGAACAGACGTCTCAACGACGACGAGCGATTCTTCATCTCT 93564
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
||||| || ||||| ||||| ||| ||||| |||||||||||||| || |||||||||
Sbjct 93563 CACGTCCTCGCCTTCTTCGCTGCCTCTGACGGTATCGTCAACGAGAACCTTGTCGAGCGT 93504
Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871
||| |||| | |||| ||| | ||||||| | || |||||||| || || ||| ||
Sbjct 93503 TTCAGCTCTG-AGGTTCAGATCCCCGAGGCCAGATGTTTCTACGGTTTCCAAATCATGAT 93445
Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGA 116931
||||||| | ||||| || | || || ||||||||||| ||| | || ||
Sbjct 93444 GGAGAACATCCACTCCGAGACCTACTCATTGCTCATCGACACATACATTAGC------GA 93391
Query 116932 GGAGAAGCTCCGT------TTGTTGAACGCCATCGAGACGATGCCGTGCGTCAA-AGAGA 116984
| |||| ||| | || ||||||||||| | || || ||| |||| ||| |
Sbjct 93390 GCCCAAGCAACGTACCTACCTCTTCAACGCCATCGACAACATTCCTTGCATCAAGAGA-A 93332
Query 116985 AGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGG 117044
||||||| ||||| || |||||| || || || | | || ||| ||| ||
Sbjct 93331 AGGCCGACTGGGCCCTCAAGTGGATCTGCGACAAGGACTCGACATTTGGCTGCCGCTTGA 93272
Query 117045 TGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGC 117104
| || ||||| ||||||||||| ||||||| || ||| ||||| |||| || ||||
Sbjct 93271 TTGCTTTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGCTCCTTCGCTTCCATCTTCTGGC 93212
Query 117105 TCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACG 117164
||||||| || || ||||||||||| || || ||| ||||||||||||||| | || |
Sbjct 93211 TCAAGAAGCGTGGTCTCATGCCCGGTCTTACCTTCTCCAACGAGCTCATCTCTCGTGATG 93152
Query 117165 AGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCG 117224
||||| |||| |||||| ||||| | || | || | | | || |
Sbjct 93151 AGGGTATGCACACCGACTTCGCCTGCCTCCTCCACTCTCACCTCAAGAACAAGCCCTCTG 93092
Query 117225 CGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCG 117284
| || | |||| | |||||| ||||||| || ||||| |||||||| ||| | | |
Sbjct 93091 CTGCTCTCGTCCGCGAGATCATCACCGAGGCTGTCGCTATCGAGCAAGAGTTCTTGTCAG 93032
Query 117285 AAGCGC-TGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGA 117342
| || | | || |||| ||| || || | || || || | |||| |||||||||||
Sbjct 93031 ATGCTCTTCCCTGTGC-TCTTCTCGGCATGAA-CGCCAAGCTCATGTGTCAATACATCGA 92974
Query 117343 GTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAA 117402
||| ||||| ||| | ||||| |||| || | || ||||| |||| | | ||||
Sbjct 92973 GTTTGTCGCTGACCGCCTGCTCCTCGCTCTCGGCGAGCCCAAGATCTACCAAGCCACCAA 92914
Query 117403 CCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434
||| | ||||| ||| | |||||| ||||
Sbjct 92913 CCCCTTCGACTTCATGGAGAACATCTCGTTGG 92882
>seq21
Length=270181
Score = 129 bits (142), Expect = 6e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||| ||||| |||||||| | || ||||| | ||
Sbjct 161425 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCGTCC 161366
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | ||||| || || | ||||| |||||||| ||| | ||||||
Sbjct 161365 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAG 161306
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| ||| ||||| ||||| || || | || || ||| ||||||||||
Sbjct 161305 CAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGTACTCTCTCCGACTACAAC 161246
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||||||||| |||| || || || ||
Sbjct 161245 ATCCAGAAGGAATCCACTCTCCACCTCGT 161217
Score = 125 bits (138), Expect = 7e-24
Identities = 142/188 (76%), Gaps = 2/188 (1%)
Strand=Plus/Minus
Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770
|||| ||||| ||||||||| | || ||||| | |||||| | | | |||| |||||
Sbjct 161631 TCACCGGCAAGACCATCACCCTTGAGGTCGAGTCATCCGACACCATTGACAACG-TCAAG 161573
Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830
|| || | ||||| || ||||| || |||| ||||| || ||||||| || |||
Sbjct 161572 AGCAAGATCCAAGACAAGGAAGGCATTCCTCCGGATCAGCAGCGCCTCATCTTTGCTGGC 161513
Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890
|| ||||| || |||| |||||||| | ||||||||||||||||||||| |||| ||
Sbjct 161512 AAGCAGCTCGAGGACGGTCGCACCCTTAGCGACTACAACATCCAGAAGGAATCCACTCTC 161453
Query 40891 CATCTAGT 40898
|| || ||
Sbjct 161452 CACCTCGT 161445
Score = 118 bits (130), Expect = 1e-21
Identities = 150/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || || || || |||||||| | || || ||| | |
Sbjct 161197 ATGCAGATCTTCGTCAAGACTCTTACTGGAAAGACCATCACATTGGAAGTGGAATCATCA 161138
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| ||||| || || | ||||| ||||| |||||| |||||||
Sbjct 161137 GACACCATCGACAACG-TCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 161079
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || |||| ||| || || ||| |||| |||| || || ||| ||||||||
Sbjct 161078 GCAGCGCCTGATCTTCGCCGGAAAGCAGTTGGAGGACGGTCGTACGCTCTCTGACTACAA 161019
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||| | || || ||
Sbjct 161018 CATCCAGAAGGAGTCAACCCTCCA 160995
>seq26
Length=70271
Score = 125 bits (138), Expect = 7e-24
Identities = 150/201 (75%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || |||||||| ||||||||| | || ||||| || | |||| | |
Sbjct 12970 TTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACCATC 12911
Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817
| |||| ||||| || || | ||||| |||||||| ||| ||||||| || || ||
Sbjct 12910 GACAACG-TCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAACAGCGCCT 12852
Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877
|||| ||| || || ||||| || || | ||||| || ||||||||||||||||||
Sbjct 12851 GATCTTCGCCGGAAAGCAGCTTGAGGATGGCCGCACTCTTTCCGACTACAACATCCAGAA 12792
Query 40878 GGAGGCCACGCTGCATCTAGT 40898
|||| | || || || || ||
Sbjct 12791 GGAGTCGACTCTTCACCTTGT 12771
>seq24
Length=268411
Score = 102 bits (112), Expect = 8e-17
Identities = 92/116 (79%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| ||||| |||||| ||||||| || || || |||| ||| ||||| ||||| ||
Sbjct 107972 GACAAGGAGGGTATCCCCCCGGACCAACAGCGCCTGATCTTCGCTGGCAAGCAGCTCGAG 107913
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|| | || |||||| |||||||||||||||||||||| ||| || || || ||
Sbjct 107912 GATGGCCGTACCCTCTCCGACTACAACATCCAGAAGGAGAGCACTCTTCACCTCGT 107857
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515218124479920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |