Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq161 336 2e-87 seq21 129 6e-25 seq26 125 7e-24 seq24 102 8e-17 >seq161 Length=251022 Score = 336 bits (372), Expect = 2e-87 Identities = 568/812 (70%), Gaps = 23/812 (3%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || ||| ||||||||| |||||||| || || |||||||||| ||||||| | || || Sbjct 93683 ATTTGGAACATGTACAAGAAGGCCGAAGCCTCTTTCTGGACCGCCGAGGAGATTGATCTC 93624 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||| ||||||| | || | |||||| ||||||| |||||| Sbjct 93623 TCCAAGGATCTTCACGACTGGAACAGACGTCTCAACGACGACGAGCGATTCTTCATCTCT 93564 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || ||||| ||||| ||| ||||| |||||||||||||| || ||||||||| Sbjct 93563 CACGTCCTCGCCTTCTTCGCTGCCTCTGACGGTATCGTCAACGAGAACCTTGTCGAGCGT 93504 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| |||| | |||| ||| | ||||||| | || |||||||| || || ||| || Sbjct 93503 TTCAGCTCTG-AGGTTCAGATCCCCGAGGCCAGATGTTTCTACGGTTTCCAAATCATGAT 93445 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGA 116931 ||||||| | ||||| || | || || ||||||||||| ||| | || || Sbjct 93444 GGAGAACATCCACTCCGAGACCTACTCATTGCTCATCGACACATACATTAGC------GA 93391 Query 116932 GGAGAAGCTCCGT------TTGTTGAACGCCATCGAGACGATGCCGTGCGTCAA-AGAGA 116984 | |||| ||| | || ||||||||||| | || || ||| |||| ||| | Sbjct 93390 GCCCAAGCAACGTACCTACCTCTTCAACGCCATCGACAACATTCCTTGCATCAAGAGA-A 93332 Query 116985 AGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGG 117044 ||||||| ||||| || |||||| || || || | | || ||| ||| || Sbjct 93331 AGGCCGACTGGGCCCTCAAGTGGATCTGCGACAAGGACTCGACATTTGGCTGCCGCTTGA 93272 Query 117045 TGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGC 117104 | || ||||| ||||||||||| ||||||| || ||| ||||| |||| || |||| Sbjct 93271 TTGCTTTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGCTCCTTCGCTTCCATCTTCTGGC 93212 Query 117105 TCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACG 117164 ||||||| || || ||||||||||| || || ||| ||||||||||||||| | || | Sbjct 93211 TCAAGAAGCGTGGTCTCATGCCCGGTCTTACCTTCTCCAACGAGCTCATCTCTCGTGATG 93152 Query 117165 AGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCG 117224 ||||| |||| |||||| ||||| | || | || | | | || | Sbjct 93151 AGGGTATGCACACCGACTTCGCCTGCCTCCTCCACTCTCACCTCAAGAACAAGCCCTCTG 93092 Query 117225 CGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCG 117284 | || | |||| | |||||| ||||||| || ||||| |||||||| ||| | | | Sbjct 93091 CTGCTCTCGTCCGCGAGATCATCACCGAGGCTGTCGCTATCGAGCAAGAGTTCTTGTCAG 93032 Query 117285 AAGCGC-TGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGA 117342 | || | | || |||| ||| || || | || || || | |||| ||||||||||| Sbjct 93031 ATGCTCTTCCCTGTGC-TCTTCTCGGCATGAA-CGCCAAGCTCATGTGTCAATACATCGA 92974 Query 117343 GTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAA 117402 ||| ||||| ||| | ||||| |||| || | || ||||| |||| | | |||| Sbjct 92973 GTTTGTCGCTGACCGCCTGCTCCTCGCTCTCGGCGAGCCCAAGATCTACCAAGCCACCAA 92914 Query 117403 CCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434 ||| | ||||| ||| | |||||| |||| Sbjct 92913 CCCCTTCGACTTCATGGAGAACATCTCGTTGG 92882 >seq21 Length=270181 Score = 129 bits (142), Expect = 6e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| |||||||| | || ||||| | || Sbjct 161425 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCGTCC 161366 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| |||||||| ||| | |||||| Sbjct 161365 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAG 161306 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| ||||| || || | || || ||| |||||||||| Sbjct 161305 CAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGTACTCTCTCCGACTACAAC 161246 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||| |||| || || || || Sbjct 161245 ATCCAGAAGGAATCCACTCTCCACCTCGT 161217 Score = 125 bits (138), Expect = 7e-24 Identities = 142/188 (76%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770 |||| ||||| ||||||||| | || ||||| | |||||| | | | |||| ||||| Sbjct 161631 TCACCGGCAAGACCATCACCCTTGAGGTCGAGTCATCCGACACCATTGACAACG-TCAAG 161573 Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830 || || | ||||| || ||||| || |||| ||||| || ||||||| || ||| Sbjct 161572 AGCAAGATCCAAGACAAGGAAGGCATTCCTCCGGATCAGCAGCGCCTCATCTTTGCTGGC 161513 Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890 || ||||| || |||| |||||||| | ||||||||||||||||||||| |||| || Sbjct 161512 AAGCAGCTCGAGGACGGTCGCACCCTTAGCGACTACAACATCCAGAAGGAATCCACTCTC 161453 Query 40891 CATCTAGT 40898 || || || Sbjct 161452 CACCTCGT 161445 Score = 118 bits (130), Expect = 1e-21 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || || || |||||||| | || || ||| | | Sbjct 161197 ATGCAGATCTTCGTCAAGACTCTTACTGGAAAGACCATCACATTGGAAGTGGAATCATCA 161138 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || || | ||||| ||||| |||||| ||||||| Sbjct 161137 GACACCATCGACAACG-TCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 161079 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| || || ||| |||| |||| || || ||| |||||||| Sbjct 161078 GCAGCGCCTGATCTTCGCCGGAAAGCAGTTGGAGGACGGTCGTACGCTCTCTGACTACAA 161019 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | || || || Sbjct 161018 CATCCAGAAGGAGTCAACCCTCCA 160995 >seq26 Length=70271 Score = 125 bits (138), Expect = 7e-24 Identities = 150/201 (75%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || |||||||| ||||||||| | || ||||| || | |||| | | Sbjct 12970 TTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACCATC 12911 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| ||||| || || | ||||| |||||||| ||| ||||||| || || || Sbjct 12910 GACAACG-TCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAACAGCGCCT 12852 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| || || ||||| || || | ||||| || |||||||||||||||||| Sbjct 12851 GATCTTCGCCGGAAAGCAGCTTGAGGATGGCCGCACTCTTTCCGACTACAACATCCAGAA 12792 Query 40878 GGAGGCCACGCTGCATCTAGT 40898 |||| | || || || || || Sbjct 12791 GGAGTCGACTCTTCACCTTGT 12771 >seq24 Length=268411 Score = 102 bits (112), Expect = 8e-17 Identities = 92/116 (79%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| |||||| ||||||| || || || |||| ||| ||||| ||||| || Sbjct 107972 GACAAGGAGGGTATCCCCCCGGACCAACAGCGCCTGATCTTCGCTGGCAAGCAGCTCGAG 107913 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || | || |||||| |||||||||||||||||||||| ||| || || || || Sbjct 107912 GATGGCCGTACCCTCTCCGACTACAACATCCAGAAGGAGAGCACTCTTCACCTCGT 107857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218124479920