Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016-
12-23] 167 sequences; 28,173,731 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq21 105 8e-18
>seq21
Length=270181
Score = 105 bits (116), Expect = 8e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
||||| || || ||||| || | ||||| || | || || |||||||| ||||||||
Sbjct 161235 TCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAG 161294
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
|| || ||||||||||| | || | || |||||||||| ||| || |||| |
Sbjct 161295 ATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTG 161354
Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172
| | |||||| ||| || || || | |||||||| ||||| || || ||||| ||
Sbjct 161355 TCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACG 161414
Query 43173 AAGATTTGCAT 43183
||||| |||||
Sbjct 161415 AAGATCTGCAT 161425
Score = 98.7 bits (108), Expect = 1e-15
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033
|||||| || | || |||||| || || ||||| |||| || || || |||| ||
Sbjct 160988 CACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTACGACCGTCCTC 161047
Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093
| |||||| || ||||| || || ||||||||||| | || | | ||||||||||
Sbjct 161048 CAACTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTG 161107
Query 43094 GATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152
||| || |||| ||| | | | ||||| |||||||| || | |||||||| |
Sbjct 161108 GATCTTCGACTTGA-CGTTGTCGATGGTGTCTGATGATTCCACTTCCAATGTGATGGTCT 161166
Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
| || || || ||||| || ||||| |||||
Sbjct 161167 TTCCAGTAAGAGTCTTGACGAAGATCTGCAT 161197
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571816406330760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |