Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq21 140 2e-28 seq26 84.2 1e-11 seq24 84.2 1e-11 >seq21 Length=270181 Score = 140 bits (154), Expect = 2e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | ||| ||| ||||| |||||||||||||| || |||| | || Sbjct 161214 AGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCATCC 161273 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| ||||| || || ||||||||||| ||| | || ||||||||| Sbjct 161274 TCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 161333 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | || | |||| ||| ||||| || | |||||||| Sbjct 161334 TGGATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTC 161393 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||||||||| || || || ||||||||||| Sbjct 161394 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 161425 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || || ||||||| ||| | || || ||||| ||||||||||| || Sbjct 160971 CCGCCACGAAGTCTGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAG 161030 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| ||| |||| ||||||||||| || ||||| || || ||||||||||| ||| Sbjct 161031 AGCGTACGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGG 161090 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | | | || | || | ||||| || Sbjct 161091 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCTGATGATTCCACT 161150 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| || || || ||||| || || ||||||||||| Sbjct 161151 TCCAATGTGATGGTCTTTCCAGTAAGAGTCTTGACGAAGATCTGCAT 161197 Score = 86.0 bits (94), Expect = 4e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | ||| ||| ||||| |||||||||||| Sbjct 161427 CCACCGCGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGCTA 161486 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| || | ||||||||| || || ||||| |||||||| || || Sbjct 161487 AGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCCGGAGGA 161546 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||| | | | | || | |||| || ||||| Sbjct 161547 ATGCCTTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCAATGGTGTCGGATGACTCGACC 161606 Query 34343 TCCACCGTGATGGTTTTGCCGGTGA 34367 || | |||||||| |||||||||| Sbjct 161607 TCAAGGGTGATGGTCTTGCCGGTGA 161631 >seq26 Length=70271 Score = 84.2 bits (92), Expect = 1e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | ||| || ||||| |||||||||||||| || ||| | || Sbjct 12768 AGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCC 12827 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || ||||| || || ||||| ||||| ||| | || ||||||||| Sbjct 12828 TCAAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCC 12887 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | || | || | || ||||| || | |||||||| Sbjct 12888 TGGATCTTGCTCTTGACGTTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTC 12947 Query 34358 TTGCCGGTGAGAGTTTTCACAAAG 34381 ||||| || || || || || ||| Sbjct 12948 TTGCCCGTAAGGGTCTTGACGAAG 12971 >seq24 Length=268411 Score = 84.2 bits (92), Expect = 1e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | ||| || || ||||| |||||||||||||| || |||| | || Sbjct 107854 AGGACGAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCC 107913 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296 || | ||||||||| ||||| || || ||||| ||||| ||| | | ||||||||| Sbjct 107914 TCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTC 107972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071342447520