Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016-
12-23] 167 sequences; 28,173,731 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq161 134 2e-26
>seq161
Length=251022
Score = 134 bits (148), Expect = 2e-26
Identities = 368/559 (66%), Gaps = 10/559 (2%)
Strand=Plus/Plus
Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641
|| ||||| ||| ||||| |||||| || | | || | ||||| || || || ||
Sbjct 93127 CAGGCGAAGTCGGTGTGCATACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTAAGA 93186
Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701
|||||||| || |||||||| || ||||| || ||||||||||| || || || ||||||
Sbjct 93187 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCAGAGAAGAAG 93246
Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGT 33758
|| || || || || || || ||||| | | ||| | | | ||||
Sbjct 93247 ATACCCTCGACGGCGGCGAAAGCAATCAAGCGGCAGCCAAATGTCGAGTCCTTGTCGCAG 93306
Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33818
|||||||| | ||||| |||||||| | || | ||||| || | || ||||| ||
Sbjct 93307 ATCCACTTGAGGGCCCAGTCGGCCTTTCTCTTGATGCAAGGAATGTTGTCGATGGCGTTG 93366
Query 33819 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCA--AAAGACTATACA 33876
||||| ||| | || || || ||| || || ||||| | || || ||
Sbjct 93367 AAGAGGTAGGTACGTTGCTTGGGCTCGCTAATGTATGTGTCGATGAGCAATGA--GTAGG 93424
Query 33877 TTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAA 33936
| || || || ||||| || || || || || |||||||||||||| ||||||| |
Sbjct 93425 TCTCGGAGTGGATGTTCTCCATCATGATTTGGAAACCGTAGAAACATCTGGCCTCGGGGA 93484
Query 33937 TCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTG 33996
|||| || || | | || || || | | || || || || || || ||| ||| |
Sbjct 93485 TCTGAACCTCAGAGCTGAAACGCTCGACAAGGTTCTCGTTGACGATACCGTCAGAGGCAG 93544
Query 33997 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC--TGGTGTTA-GTTTATTCC 34053
| || || || | || || || || || ||||| | || | || | ||||
Sbjct 93545 CGAAGAAGGCGAGGACGTGAGAGATGAAGAATCGCTCGTCGTCGTTGAGACGTCTGTTCC 93604
Query 34054 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 34113
| || | | ||| || || | ||| | || || | ||||| || || || || ||||
Sbjct 93605 AGTCGTGAAGATCCTTGGAGAGATCAATCTCCTCGGCGGTCCAGAAAGAGGCTTCGGCCT 93664
Query 34114 TTTTATACATATTCCAGAT 34132
| || ||||| ||||| ||
Sbjct 93665 TCTTGTACATGTTCCAAAT 93683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629816285255760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |