Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq161 134 2e-26 >seq161 Length=251022 Score = 134 bits (148), Expect = 2e-26 Identities = 368/559 (66%), Gaps = 10/559 (2%) Strand=Plus/Plus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || ||||| ||| ||||| |||||| || | | || | ||||| || || || || Sbjct 93127 CAGGCGAAGTCGGTGTGCATACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTAAGA 93186 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 |||||||| || |||||||| || ||||| || ||||||||||| || || || |||||| Sbjct 93187 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCAGAGAAGAAG 93246 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGT 33758 || || || || || || || ||||| | | ||| | | | |||| Sbjct 93247 ATACCCTCGACGGCGGCGAAAGCAATCAAGCGGCAGCCAAATGTCGAGTCCTTGTCGCAG 93306 Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33818 |||||||| | ||||| |||||||| | || | ||||| || | || ||||| || Sbjct 93307 ATCCACTTGAGGGCCCAGTCGGCCTTTCTCTTGATGCAAGGAATGTTGTCGATGGCGTTG 93366 Query 33819 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCA--AAAGACTATACA 33876 ||||| ||| | || || || ||| || || ||||| | || || || Sbjct 93367 AAGAGGTAGGTACGTTGCTTGGGCTCGCTAATGTATGTGTCGATGAGCAATGA--GTAGG 93424 Query 33877 TTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAA 33936 | || || || ||||| || || || || || |||||||||||||| ||||||| | Sbjct 93425 TCTCGGAGTGGATGTTCTCCATCATGATTTGGAAACCGTAGAAACATCTGGCCTCGGGGA 93484 Query 33937 TCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTG 33996 |||| || || | | || || || | | || || || || || || ||| ||| | Sbjct 93485 TCTGAACCTCAGAGCTGAAACGCTCGACAAGGTTCTCGTTGACGATACCGTCAGAGGCAG 93544 Query 33997 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC--TGGTGTTA-GTTTATTCC 34053 | || || || | || || || || || ||||| | || | || | |||| Sbjct 93545 CGAAGAAGGCGAGGACGTGAGAGATGAAGAATCGCTCGTCGTCGTTGAGACGTCTGTTCC 93604 Query 34054 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 34113 | || | | ||| || || | ||| | || || | ||||| || || || || |||| Sbjct 93605 AGTCGTGAAGATCCTTGGAGAGATCAATCTCCTCGGCGGTCCAGAAAGAGGCTTCGGCCT 93664 Query 34114 TTTTATACATATTCCAGAT 34132 | || ||||| ||||| || Sbjct 93665 TCTTGTACATGTTCCAAAT 93683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816285255760