Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016-
12-23] 167 sequences; 28,173,731 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq161 152 7e-32
>seq161
Length=251022
Score = 152 bits (168), Expect = 7e-32
Identities = 372/559 (67%), Gaps = 10/559 (2%)
Strand=Plus/Plus
Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124
|| ||||| ||| ||||| ||||||||| | | || | |||||||| || || ||
Sbjct 93127 CAGGCGAAGTCGGTGTGCATACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTAAGA 93186
Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184
|||||||| || |||||||| || ||||| || || || || || || ||||| ||||||
Sbjct 93187 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCAGAGAAGAAG 93246
Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGT 42241
|| || || || || || || ||||| | | ||| | | | ||||
Sbjct 93247 ATACCCTCGACGGCGGCGAAAGCAATCAAGCGGCAGCCAAATGTCGAGTCCTTGTCGCAG 93306
Query 42242 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 42301
|||||||| | ||||| |||||||| | || | ||||| || | || ||||| ||
Sbjct 93307 ATCCACTTGAGGGCCCAGTCGGCCTTTCTCTTGATGCAAGGAATGTTGTCGATGGCGTTG 93366
Query 42302 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCA--AAAGACTATACA 42359
||||| ||| | || || || ||| ||||| ||||| | || || ||
Sbjct 93367 AAGAGGTAGGTACGTTGCTTGGGCTCGCTAATGTATGTGTCGATGAGCAATGAGTAGG-- 93424
Query 42360 TTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAA 42419
| || || || ||||| || || || || || |||||||||||||||||||||| |
Sbjct 93425 TCTCGGAGTGGATGTTCTCCATCATGATTTGGAAACCGTAGAAACATCTGGCCTCGGGGA 93484
Query 42420 CCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTG 42479
||| || || | | || || || | | || ||||| || || |||||| ||| |
Sbjct 93485 TCTGAACCTCAGAGCTGAAACGCTCGACAAGGTTCTCGTTGACGATACCGTCAGAGGCAG 93544
Query 42480 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC--CGGTGTTA-ATTTATTCC 42536
| || || || | || || || || || ||||| || || | | | ||||
Sbjct 93545 CGAAGAAGGCGAGGACGTGAGAGATGAAGAATCGCTCGTCGTCGTTGAGACGTCTGTTCC 93604
Query 42537 AATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCT 42596
| || | | ||| || || | ||| | || || | ||||| || || ||||| ||||
Sbjct 93605 AGTCGTGAAGATCCTTGGAGAGATCAATCTCCTCGGCGGTCCAGAAAGAGGCTTCGGCCT 93664
Query 42597 TTTTATACATATTCCAGAT 42615
| || ||||| ||||| ||
Sbjct 93665 TCTTGTACATGTTCCAAAT 93683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671137798996920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |