Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq161 152 7e-32 >seq161 Length=251022 Score = 152 bits (168), Expect = 7e-32 Identities = 372/559 (67%), Gaps = 10/559 (2%) Strand=Plus/Plus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 || ||||| ||| ||||| ||||||||| | | || | |||||||| || || || Sbjct 93127 CAGGCGAAGTCGGTGTGCATACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTAAGA 93186 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184 |||||||| || |||||||| || ||||| || || || || || || ||||| |||||| Sbjct 93187 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCAGAGAAGAAG 93246 Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGT 42241 || || || || || || || ||||| | | ||| | | | |||| Sbjct 93247 ATACCCTCGACGGCGGCGAAAGCAATCAAGCGGCAGCCAAATGTCGAGTCCTTGTCGCAG 93306 Query 42242 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 42301 |||||||| | ||||| |||||||| | || | ||||| || | || ||||| || Sbjct 93307 ATCCACTTGAGGGCCCAGTCGGCCTTTCTCTTGATGCAAGGAATGTTGTCGATGGCGTTG 93366 Query 42302 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCA--AAAGACTATACA 42359 ||||| ||| | || || || ||| ||||| ||||| | || || || Sbjct 93367 AAGAGGTAGGTACGTTGCTTGGGCTCGCTAATGTATGTGTCGATGAGCAATGAGTAGG-- 93424 Query 42360 TTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAA 42419 | || || || ||||| || || || || || |||||||||||||||||||||| | Sbjct 93425 TCTCGGAGTGGATGTTCTCCATCATGATTTGGAAACCGTAGAAACATCTGGCCTCGGGGA 93484 Query 42420 CCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTG 42479 ||| || || | | || || || | | || ||||| || || |||||| ||| | Sbjct 93485 TCTGAACCTCAGAGCTGAAACGCTCGACAAGGTTCTCGTTGACGATACCGTCAGAGGCAG 93544 Query 42480 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC--CGGTGTTA-ATTTATTCC 42536 | || || || | || || || || || ||||| || || | | | |||| Sbjct 93545 CGAAGAAGGCGAGGACGTGAGAGATGAAGAATCGCTCGTCGTCGTTGAGACGTCTGTTCC 93604 Query 42537 AATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCT 42596 | || | | ||| || || | ||| | || || | ||||| || || ||||| |||| Sbjct 93605 AGTCGTGAAGATCCTTGGAGAGATCAATCTCCTCGGCGGTCCAGAAAGAGGCTTCGGCCT 93664 Query 42597 TTTTATACATATTCCAGAT 42615 | || ||||| ||||| || Sbjct 93665 TCTTGTACATGTTCCAAAT 93683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671137798996920