Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq161 205 1e-47 seq85 129 9e-25 >seq161 Length=251022 Score = 205 bits (226), Expect = 1e-47 Identities = 561/847 (66%), Gaps = 27/847 (3%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 |||||| | |||||||| ||||| | ||||| || ||||| | ||| ||| | ||||| Sbjct 93683 ATTTGGAACATGTACAAGAAGGCCGAAGCCTCTTTCTGGACCGCCGAGGAGATTGATCTC 93624 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| || |||| ||| | | ||| | | || |||||| || || || Sbjct 93623 TCCAAGGATCTTCACGACTGGAACAGACGTCTCAACGACGACGAGCGATTCTTCATCTCT 93564 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATC-TGTTGACACG 125197 ||| | | |||||||| || | ||| || || ||||||||||| || | ||| || || Sbjct 93563 CACGTCCTCGCCTTCTTCGCTGCCTCTGACGGTATCGTCAACGAGAACCTTGTCGA-GCG 93505 Query 125198 ATTC-TCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256 ||| ||| ||| | || || |||| || || ||||| ||||||||||||| Sbjct 93504 TTTCAGCTC-TGAGGTTCAGATCCCCGAGGCCAGATGTTTCTACGGTTTCCAAATCATGA 93446 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC-- 125314 | |||||| | ||||| || | ||||| || || |||| |||||| |||| || Sbjct 93445 TGGAGAACATCCACTCCGAGACCTACTCATTGCTCATCGACACATACATTAGCGAGCCCA 93386 Query 125315 -GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGG 125373 |||||||| || ||||| ||||| ||||||| | || | || | ||||| Sbjct 93385 AGCAACGTACCTAC---CTCTTCAACGCCATCGACAACATTCCTTGCATCAAGAGAAAGG 93329 Query 125374 CTCAATGGGTGATTCGGTGGATCGATGACGACAAG---TCTTCGTACGCCGACAGACTGG 125430 | | |||| | ||||||| || ||||||| || | | | | | | || Sbjct 93328 CCGACTGGGCCCTCAAGTGGATC--TG-CGACAAGGACTCGACATTTGGCTGCCGCTTGA 93272 Query 125431 TGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGC 125490 | || ||||||||||| ||||| |||||||| || || || || ||||||| |||| Sbjct 93271 TTGCTTTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGCTCCTTCGCTTCCATCTTCTGGC 93212 Query 125491 TCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACG 125550 |||||||||| || ||||||||||| || || | |||||| | || ||||| || | Sbjct 93211 TCAAGAAGCGTGGTCTCATGCCCGGTCTTACCTTCTCCAACGAGCTCATCTCTCGTGATG 93152 Query 125551 AGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCA 125610 |||| | ||| ||||| ||| || || | ||| | | | | || || Sbjct 93151 AGGGTATGCACACCGACTTCGCCTGCCTCCT------CCACTCT---CACCTCAAGAACA 93101 Query 125611 GATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGT 125670 || | || ||| | | || | ||||| || || || || ||||||| Sbjct 93100 AGCCCTCTGCTGCTCTCGTCCGCGAGATCATCACCGAGGCTGTCGCTATCGAGCAAGAGT 93041 Query 125671 TTCTAACCGAATCCCTACCGGTCAGC-ATGATTGGCATGAACTGCAAGCTAATGTGCGAG 125729 | | | || | || || | || | | ||||||||| |||||| ||||| | Sbjct 93040 TCTTGTCAGATGCTCTTCC-CTGTGCTCTTCTCGGCATGAACGCCAAGCTCATGTGTCAA 92982 Query 125730 TACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGATTTACAAC 125789 ||||| |||||||| || || || || || || | | | |||||| ||| | Sbjct 92981 TACATCGAGTTTGTCGCTGACCGCCTGCTCCTCGCTCTCGGCGAGCCCAAGATCTACCAA 92922 Query 125790 GCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTC 125849 |||| || ||||| || |||||| | ||| || | | || ||||||||||| ||| Sbjct 92921 GCCACCAACCCCTTCGACTTCATGGAGAACATCTCGTTGGCTGGCAAGACCAACTTCTTC 92862 Query 125850 GAGAAGA 125856 ||||||| Sbjct 92861 GAGAAGA 92855 >seq85 Length=501717 Score = 129 bits (142), Expect = 9e-25 Identities = 315/472 (67%), Gaps = 4/472 (1%) Strand=Plus/Minus Query 96865 GATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTT 96924 |||| ||| ||||| ||||| || || || || || | ||| ||||| | || |||| Sbjct 350943 GATATGTTGACCAGGGTGGCAACAAGCGTCCCGGTGCCTTCGCCATCTACCTCGAGCCTT 350884 Query 96925 GGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC 96984 ||||||| || || || | || |||| | ||||| ||| ||| || |||| | Sbjct 350883 GGCACGCTGATGTCTTCGCTTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTTC 350824 Query 96985 GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACG 97044 | || | ||| | || || || |||||| | || ||| | ||||||||||| || | Sbjct 350823 GTGCTCGCGACCTCTTCTACGCCCTCTGGATCCCCGATCTCTTCATGAAGCGTGTGGAGC 350764 Query 97045 ACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGG 97104 | | ||||| || ||||||||| | || || ||||| ||||| || | Sbjct 350763 AAAACTCCACCTGGACTCTGATGTGCCCCAGCGAGTGCCCTGGTCTTGCCGATGTCTACG 350704 Query 97105 GCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGA 97163 | || ||||| |||||| |||| | ||||||| ||||| || || || || | Sbjct 350703 GTGATGAGTTCGAGGCCTTGTACGAGAAGTACGAGCGCGAGGGTCGTGGTCGCGACACCA 350644 Query 97164 GTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCC 97222 || || | |||| || ||| | |||||| | |||||| |||||||| | || Sbjct 350643 -TCCGCGCTC-AGAAGCTCTGGTACGCCATCCTCGAGGCTCAAACCGAGACTGGTAACCC 350586 Query 97223 GTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCAT 97282 | ||| |||||||||||| | || ||||| |||||||| || | || ||| Sbjct 350585 TTTCATGCTCTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTTGGTGTCAT 350526 Query 97283 CAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334 ||||||| ||||||| || ||| | |||||| || |||| || ||| Sbjct 350525 TCGCAGCTCCAACTTGTGCACCGAGATTATCGAGTACACCGCTCCCGATGAG 350474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057653038920