Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq161 156 5e-33 >seq161 Length=251022 Score = 156 bits (172), Expect = 5e-33 Identities = 373/559 (67%), Gaps = 10/559 (2%) Strand=Plus/Plus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || ||||| ||| ||||| |||||| || | | || || |||||||| || || || Sbjct 93127 CAGGCGAAGTCGGTGTGCATACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTAAGA 93186 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 |||||||| || |||||||| || ||||| || ||||||||||| || ||||| |||||| Sbjct 93187 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCAGAGAAGAAG 93246 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGT 33480 || || || || || || || ||||| | | ||| | | | |||| Sbjct 93247 ATACCCTCGACGGCGGCGAAAGCAATCAAGCGGCAGCCAAATGTCGAGTCCTTGTCGCAG 93306 Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540 |||||||| | ||||| |||||||| | || | ||||| || | || ||||| || Sbjct 93307 ATCCACTTGAGGGCCCAGTCGGCCTTTCTCTTGATGCAAGGAATGTTGTCGATGGCGTTG 93366 Query 33541 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCA--AAAGACTATACA 33598 ||||| ||| | || || || ||| || || ||||| | || || || Sbjct 93367 AAGAGGTAGGTACGTTGCTTGGGCTCGCTAATGTATGTGTCGATGAGCAATGA--GTAGG 93424 Query 33599 TTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAA 33658 | || || || ||||| || || || || || |||||||||||||| ||||||| | Sbjct 93425 TCTCGGAGTGGATGTTCTCCATCATGATTTGGAAACCGTAGAAACATCTGGCCTCGGGGA 93484 Query 33659 TCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTG 33718 |||| || || | | || || || | | || || || || || |||||| ||| | Sbjct 93485 TCTGAACCTCAGAGCTGAAACGCTCGACAAGGTTCTCGTTGACGATACCGTCAGAGGCAG 93544 Query 33719 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC--TGGTGTTA-GTTTATTCC 33775 | || || || | || || || || || ||||| | || | || | |||| Sbjct 93545 CGAAGAAGGCGAGGACGTGAGAGATGAAGAATCGCTCGTCGTCGTTGAGACGTCTGTTCC 93604 Query 33776 AATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33835 | || | | ||| || || | ||| | || || | ||||| || || || || |||| Sbjct 93605 AGTCGTGAAGATCCTTGGAGAGATCAATCTCCTCGGCGGTCCAGAAAGAGGCTTCGGCCT 93664 Query 33836 TTTTATACATGTTCCAGAT 33854 | || ||||||||||| || Sbjct 93665 TCTTGTACATGTTCCAAAT 93683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622945899597720