Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016-
12-23] 167 sequences; 28,173,731 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq161 114 1e-20
seq21 114 1e-20
seq26 96.9 3e-15
>seq161
Length=251022
Score = 114 bits (126), Expect = 1e-20
Identities = 324/492 (66%), Gaps = 7/492 (1%)
Strand=Plus/Minus
Query 46106 CCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGTATGGTGG 46165
|||||||||| | ||||||||| | || | |||| || | | || || | |
Sbjct 93328 CCGACTGGGCCCTCAAGTGGATCTGCGACAAGGACTCGACATTTGGCTGCCGCTTGATTG 93269
Query 46166 CCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACATCA 46225
| || || || ||||| |||| || |||||| || || ||||||| | |||
Sbjct 93268 CTTTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGCTCCTTCGCTTCCATCTTCTGGCTCA 93209
Query 46226 A-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAG 46284
| || | || | |||||||||| || || || ||||||||| || || || || |||
Sbjct 93208 AGAAGCGTGGTC-TCATGCCCGGTCTTACCTTCTCCAACGAGCTCATCTCTCGTGATGAG 93150
Query 46285 GGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACAAGCTTGCG 46344
|| |||| || ||||| || || ||| | | | ||| | | | |||||| |
Sbjct 93149 GGTATGCACACCGACTTCGCCTGCCTCCTCCA---CTCTCACCTCAAGAACAAGCCCTCT 93093
Query 46345 CCCGACACCGTGCT-GAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTAC 46403
| | ||| | ||| || ||| ||||| || || || ||| | ||||| || |
Sbjct 93092 GCTGCTCTCGTCCGCGAG-ATCATCACCGAGGCTGTCGCTATCGAGCAAGAGTTCTTGTC 93034
Query 46404 GGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGACTACATCGA 46463
| || || ||| ||| || || ||||||||||| || ||||| | ||||||||
Sbjct 93033 AGATGCTCTTCCCTGTGCTCTTCTCGGCATGAACGCCAAGCTCATGTGTCAATACATCGA 92974
Query 46464 GTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCACGCGCGCAA 46523
|||||| || ||||| |||||| | || | |||| ||| | || || |||
Sbjct 92973 GTTTGTCGCTGACCGCCTGCTCCTCGCTCTCGGCGAGCCCAAGATCTACCAAGCCACCAA 92914
Query 46524 TCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTCGAAAAGCG 46583
|| || || || ||| | |||||||| ||| ||||| || || || ||||| ||| |
Sbjct 92913 CCCCTTCGACTTCATGGAGAACATCTCGTTGGCTGGCAAGACCAACTTCTTCGAGAAGAG 92854
Query 46584 CGTCGGCGAGTA 46595
|| || || ||
Sbjct 92853 AGTTGGTGACTA 92842
>seq21
Length=270181
Score = 114 bits (126), Expect = 1e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||| | ||| || || | || | || || ||||| || |||||||| |||||
Sbjct 161427 CCACCGCGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGCTA 161486
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| ||||||||||| || |||| | |||||||| ||||||||
Sbjct 161487 AGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCCGGAGGA 161546
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| ||| || ||||| | || | || |||| |||||||
Sbjct 161547 ATGCCTTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCAATGGTGTCGGATGACTCGACC 161606
Query 131188 TCGACGGTAACGGTTTTACCGGT 131210
|| | ||| | ||| || |||||
Sbjct 161607 TCAAGGGTGATGGTCTTGCCGGT 161629
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | || | || || ||||| || |||||||| |||
Sbjct 161199 CCACCACGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAG 161258
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||||| ||||||||||| ||| |||| | ||||||||||| || ||
Sbjct 161259 AGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGGGGA 161318
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| ||| ||||| | || | || |||| |||||||
Sbjct 161319 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGACC 161378
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || ||||| || || || ||||| ||||||||
Sbjct 161379 TCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 161425
Score = 98.7 bits (108), Expect = 9e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082
||||| || || | ||| |||||||| || |||||||| || | || || ||||
Sbjct 160986 AGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTACGACCGTCC 161045
Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142
|| | |||||| || ||| |||| | |||||||||||||| ||||| || || |||||
Sbjct 161046 TCCAACTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 161105
Query 131143 GTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTT 131202
||| ||| ||||| | || | || || | || || | || | || | |||
Sbjct 161106 TGGATCTTCGACTTGACGTTGTCGATGGTGTCTGATGATTCCACTTCCAATGTGATGGTC 161165
Query 131203 TTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| || || ||||| || ||||| ||||||||
Sbjct 161166 TTTCCAGTAAGAGTCTTGACGAAGATCTGCAT 161197
>seq26
Length=70271
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | || | ||||||||||| || |||||||| |||
Sbjct 12753 CCACCACGGAGACGGAGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAA 12812
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| |||||||| || ||| |||| | ||||| |||||||| ||
Sbjct 12813 AGAGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCCGGGGGA 12872
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || || | ||||||||
Sbjct 12873 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCAGAGGACTCGACC 12932
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAA 131225
|| | ||| | ||| || || || || || || |||||
Sbjct 12933 TCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 12970
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472011814673280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |