Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq161 114 1e-20 seq21 114 1e-20 seq26 96.9 3e-15 >seq161 Length=251022 Score = 114 bits (126), Expect = 1e-20 Identities = 324/492 (66%), Gaps = 7/492 (1%) Strand=Plus/Minus Query 46106 CCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGTATGGTGG 46165 |||||||||| | ||||||||| | || | |||| || | | || || | | Sbjct 93328 CCGACTGGGCCCTCAAGTGGATCTGCGACAAGGACTCGACATTTGGCTGCCGCTTGATTG 93269 Query 46166 CCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACATCA 46225 | || || || ||||| |||| || |||||| || || ||||||| | ||| Sbjct 93268 CTTTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGCTCCTTCGCTTCCATCTTCTGGCTCA 93209 Query 46226 A-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAG 46284 | || | || | |||||||||| || || || ||||||||| || || || || ||| Sbjct 93208 AGAAGCGTGGTC-TCATGCCCGGTCTTACCTTCTCCAACGAGCTCATCTCTCGTGATGAG 93150 Query 46285 GGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACAAGCTTGCG 46344 || |||| || ||||| || || ||| | | | ||| | | | |||||| | Sbjct 93149 GGTATGCACACCGACTTCGCCTGCCTCCTCCA---CTCTCACCTCAAGAACAAGCCCTCT 93093 Query 46345 CCCGACACCGTGCT-GAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTAC 46403 | | ||| | ||| || ||| ||||| || || || ||| | ||||| || | Sbjct 93092 GCTGCTCTCGTCCGCGAG-ATCATCACCGAGGCTGTCGCTATCGAGCAAGAGTTCTTGTC 93034 Query 46404 GGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGACTACATCGA 46463 | || || ||| ||| || || ||||||||||| || ||||| | |||||||| Sbjct 93033 AGATGCTCTTCCCTGTGCTCTTCTCGGCATGAACGCCAAGCTCATGTGTCAATACATCGA 92974 Query 46464 GTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCACGCGCGCAA 46523 |||||| || ||||| |||||| | || | |||| ||| | || || ||| Sbjct 92973 GTTTGTCGCTGACCGCCTGCTCCTCGCTCTCGGCGAGCCCAAGATCTACCAAGCCACCAA 92914 Query 46524 TCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTCGAAAAGCG 46583 || || || || ||| | |||||||| ||| ||||| || || || ||||| ||| | Sbjct 92913 CCCCTTCGACTTCATGGAGAACATCTCGTTGGCTGGCAAGACCAACTTCTTCGAGAAGAG 92854 Query 46584 CGTCGGCGAGTA 46595 || || || || Sbjct 92853 AGTTGGTGACTA 92842 >seq21 Length=270181 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| || || | || | || || ||||| || |||||||| ||||| Sbjct 161427 CCACCGCGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGCTA 161486 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| || |||| | |||||||| |||||||| Sbjct 161487 AGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCCGGAGGA 161546 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | || | || |||| ||||||| Sbjct 161547 ATGCCTTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCAATGGTGTCGGATGACTCGACC 161606 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 || | ||| | ||| || ||||| Sbjct 161607 TCAAGGGTGATGGTCTTGCCGGT 161629 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | || || ||||| || |||||||| ||| Sbjct 161199 CCACCACGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAG 161258 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| ||||||||||| ||| |||| | ||||||||||| || || Sbjct 161259 AGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGGGGA 161318 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||||| | || | || |||| ||||||| Sbjct 161319 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGACC 161378 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || ||||| || || || ||||| |||||||| Sbjct 161379 TCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 161425 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 ||||| || || | ||| |||||||| || |||||||| || | || || |||| Sbjct 160986 AGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTACGACCGTCC 161045 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 || | |||||| || ||| |||| | |||||||||||||| ||||| || || ||||| Sbjct 161046 TCCAACTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 161105 Query 131143 GTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTT 131202 ||| ||| ||||| | || | || || | || || | || | || | ||| Sbjct 161106 TGGATCTTCGACTTGACGTTGTCGATGGTGTCTGATGATTCCACTTCCAATGTGATGGTC 161165 Query 131203 TTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || || ||||| || ||||| |||||||| Sbjct 161166 TTTCCAGTAAGAGTCTTGACGAAGATCTGCAT 161197 >seq26 Length=70271 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | ||||||||||| || |||||||| ||| Sbjct 12753 CCACCACGGAGACGGAGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAA 12812 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| |||||||| || ||| |||| | ||||| |||||||| || Sbjct 12813 AGAGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCCGGGGGA 12872 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | |||||||| Sbjct 12873 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCAGAGGACTCGACC 12932 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAA 131225 || | ||| | ||| || || || || || || ||||| Sbjct 12933 TCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 12970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472011814673280