Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq161 176 5e-39 >seq161 Length=251022 Score = 176 bits (194), Expect = 5e-39 Identities = 479/725 (66%), Gaps = 9/725 (1%) Strand=Plus/Plus Query 92927 TCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTACA 92986 ||||| ||||| || ||||| ||| |||| | | ||||| || |||||| | ||| Sbjct 92962 TCAGCGACAAACTCGATGTATTGACACATGAGCTTGGCGTTCATGCCGAGAAGA-GCACA 93020 Query 92987 GGTA-GAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTAT 93045 || | |||| || | |||||| |||| |||||| | || || || | | ||| || Sbjct 93021 GGGAAGAGCATCTGACAAGAACTCTTGCTCGATAGCGACAGCCTCGGTGATGATCTCGCG 93080 Query 93046 TACTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGTCGGT 93105 || | | | || || | || | | || | | ||| || |||||||| Sbjct 93081 GACGAGAGCAGCAGAGGGCTTGTTCTTGAGGTGAGAGTGGAGGAGGCAGGCGAAGTCGGT 93140 Query 93106 ATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCC 93165 || | ||| || || || || || | ||| ||| ||| || | ||| || | || || Sbjct 93141 GTGCATACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCATGAGACC 93200 Query 93166 TCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGC 93225 || ||||||||||| || || ||||| || ||||| || || ||||| || ||||| Sbjct 93201 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCAGAGAAGAAGATACCCTCGACGGC 93260 Query 93226 TGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGC 93285 || || || | | || | |||| | | | || || |||||| || | || Sbjct 93261 GGCGAAAGCAATCAAGCGGCAGCCAAATGTCGAGTCCTTGTCGCAGATCCACTTGAGGGC 93320 Query 93286 CCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT-TCGATAGCGTTAAATAGGTAATCTC 93344 ||| ||||| ||| |||| || ||||| | |||| ||||| ||||| || ||||| | Sbjct 93321 CCAGTCGGCCTTTCTCTTGATGCAAGGAA-TGTTGTCGATGGCGTTGAAGAGGTAGGTAC 93379 Query 93345 GCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACAT 93404 | | | | || | |||||||| ||||| | || || || | || || |||| | Sbjct 93380 GTTGCTTGGGCTCGCTAATGTATGTGTCGATGAGCAATGAGTAGGTCTCGGAGTGGATGT 93439 Query 93405 TCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAG 93464 ||||||| |||||||| |||||||||||||| || || | |||||| || || ||| Sbjct 93440 TCTCCATCATGATTTGGAAACCGTAGAAACATCTGGCCTCGGGGATCTGAACCTC-AGAG 93498 Query 93465 -AAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAAT 93523 || | ||| || || || || ||||| ||||| || || || || || || || | Sbjct 93499 CTGAAACGCTCGACAAGGTTCTCGTTGACGATACCGTCAGAGGCAGCGAAGAAGGCGAGG 93558 Query 93524 ATATGCTTTATAAAATGTTTCTCATCATCTTT---AAGCTTATCCCAATCGGATAGATCT 93580 | || || || | ||| || || || | | | | ||| ||| ||||| Sbjct 93559 ACGTGAGAGATGAAGAATCGCTCGTCGTCGTTGAGACGTCTGTTCCAGTCGTGAAGATCC 93618 Query 93581 TTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCC 93640 || || ||||| | || ||| | ||||| || || ||||| || || |||||||| | | Sbjct 93619 TTGGAGAGATCAATCTCCTCGGCGGTCCAGAAAGAGGCTTCGGCCTTCTTGTACATGTTC 93678 Query 93641 CATAT 93645 || || Sbjct 93679 CAAAT 93683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556859637553080