Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016-
12-23] 167 sequences; 28,173,731 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq21 116 3e-21
seq26 91.5 1e-13
seq24 84.2 2e-11
>seq21
Length=270181
Score = 116 bits (128), Expect = 3e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | ||||| || || |||||||||| || || | ||
Sbjct 161425 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCGTCC 161366
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || |||| || || || ||||||||||| ||||| || || ||
Sbjct 161365 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAG 161306
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || || || ||||| ||| | |||||| ||| || ||||||| ||||||
Sbjct 161305 CAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGTACTCTCTCCGACTACAAC 161246
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || || ||||||||
Sbjct 161245 ATCCAGAAGGAATCCAC 161229
Score = 96.9 bits (106), Expect = 3e-15
Identities = 125/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
||||| || || |||| ||||| || || | |||| ||| | ||| | ||||
Sbjct 161629 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCATCCGACACCATTGACAACGTCAAGAGC 161570
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || ||||||||||| || ||||| || ||||| || || || || ||||| |||||
Sbjct 161569 AAGATCCAAGACAAGGAAGGCATTCCTCCGGATCAGCAGCGCCTCATCTTTGCTGGCAAG 161510
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
||| | ||||| |||||| | ||| |||||||| || || ||||||||
Sbjct 161509 CAGCTCGAGGACGGTCGCACCCTTAGCGACTACAACATCCAGAAGGAATCCAC 161457
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || ||| | || || || || |||| | ||||||||| | |
Sbjct 161197 ATGCAGATCTTCGTCAAGACTCTTACTGGAAAGACCATCACATTGGAAGTGGAATCATCA 161138
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | |||| || || || |||||||||||||| || || || ||
Sbjct 161137 GACACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 161078
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || || ||||| || ||||| ||||| || || |||| || ||||||
Sbjct 161077 CAGCGCCTGATCTTCGCCGGAAAGCAGTTGGAGGACGGTCGTACGCTCTCTGACTACAAC 161018
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|| || || || || ||| | || || ||
Sbjct 161017 ATCCAGAAGGAGTCAACCCTCCACTTGGT 160989
>seq26
Length=70271
Score = 91.5 bits (100), Expect = 1e-13
Identities = 124/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| || || || |||| ||||| || || || | || ||| | ||| | ||||
Sbjct 12955 ACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACCATCGACAACGTCAAGAGC 12896
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || ||||||||||| ||||| || || ||||| || || || || ||||| ||
Sbjct 12895 AAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAACAGCGCCTGATCTTCGCCGGAAAG 12836
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
||| | |||||| |||||| | ||||| |||||||| || || || || ||
Sbjct 12835 CAGCTTGAGGATGGCCGCACTCTTTCCGACTACAACATCCAGAAGGAGTCGAC 12783
>seq24
Length=268411
Score = 84.2 bits (92), Expect = 2e-11
Identities = 78/99 (79%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370
||||||||||||||| || || || ||||| || || || || || ||||| ||| | ||
Sbjct 107973 AGACAAGGAGGGTATCCCCCCGGACCAACAGCGCCTGATCTTCGCTGGCAAGCAGCTCGA 107914
Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGA 22409
|||| ||| ||| ||||||| |||||||| || || ||
Sbjct 107913 GGATGGCCGTACCCTCTCCGACTACAACATCCAGAAGGA 107875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727145722355
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |