Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016-
12-23] 167 sequences; 28,173,731 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq161 145 2e-29
seq61 111 3e-19
seq74 95.1 2e-14
seq99 89.7 1e-12
>seq161
Length=251022
Score = 145 bits (160), Expect = 2e-29
Identities = 271/398 (68%), Gaps = 0/398 (0%)
Strand=Plus/Plus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| ||| ||||| ||||||||||||||||||||| |||
Sbjct 92860 TCGAAGAAGTTGGTCTTGCCAGCCAACGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTG 92919
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
|| | ||| |||||| | ||| || || | || | |||||| || |||||||| |
Sbjct 92920 GCTTGGTAGATCTTGGGCTCGCCGAGAGCGAGGAGCAGGCGGTCAGCGACAAACTCGATG 92979
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
|| || | ||| || | | ||||||||| | | | ||| |||| || || | | |
Sbjct 92980 TATTGACACATGAGCTTGGCGTTCATGCCGAGAAGAGCACAGGGAAGAGCATCTGACAAG 93039
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAGC 251802
|| || | ||| | || || ||||| | || | || | || ||| ||
Sbjct 93040 AACTCTTGCTCGATAGCGACAGCCTCGGTGATGATCTCGCGGACGAGAGCAGCAGAGGGC 93099
Query 251803 TTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCGA 251862
||||||| || | |||| ||||| | | || | ||||| |||||| || |||
Sbjct 93100 TTGTTCTTGAGGTGAGAGTGGAGGAGGCAGGCGAAGTCGGTGTGCATACCCTCATCACGA 93159
Query 251863 CTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAAG 251922
||||| ||||||||| | || || ||||| | ||||| ||| |||||||||||
Sbjct 93160 GAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAG 93219
Query 251923 ATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGAC 251960
|| | ||||| |||||||| | | |||||||||
Sbjct 93220 ATGGAAGCGAAGGAGCCAGAGAAGAAGATACCCTCGAC 93257
>seq61
Length=336882
Score = 111 bits (122), Expect = 3e-19
Identities = 255/378 (67%), Gaps = 12/378 (3%)
Strand=Plus/Minus
Query 87612 CATCTTCGATGCTGACTTCTGCCCGCGCAAGGACTTCATCACGGAAATTATGCCATACTT 87671
||||| |||||| ||||||||||| || |||||| || ||| | || || | |
Sbjct 295206 CATCTACGATGCCGACTTCTGCCCCCGATCCGACTTCCTCCTGGAGACCATTCCTCA--T 295149
Query 87672 CAACT-----ATGACAAATCCATCGCCATCGTCCAGACCCCCCAGTTCTTTGAGGTGCGT 87726
|| || |||||||| | | || || || ||||| || || ||||| || |
Sbjct 295148 CACCTTGCTGATGACAAA--CTTTGC-ATTGTTCAGACACCTCAATTCTTCCGAGTCTCT 295092
Query 87727 CCAGACCAGACTTGGGTAGAGCGTGCTGCAGGTTCTGTCCAGGAACTGTTCTACCGCTTC 87786
|| || |||||||| || | | |||| || | || |||||| ||||||| || ||
Sbjct 295091 GACGAACAAACTTGGGTTGAACAGGGTGCAAGTGCCGTTCAGGAATTGTTCTATCGTGTC 295032
Query 87787 ATCCAGGTGTCTCGCGAATCATTTGGC-GCTGCAGTGTGCGTGGGTACTTGTGCTATGTA 87845
| || ||| || |||| | || ||| | | || || |||| |||| | ||
Sbjct 295031 GTTCAAGTGAACCGA-AATCGCTGGGGAGCTTCGATCTGTGTTGGTAGCAATGCTGTCTA 294973
Query 87846 TCGTCGCGAGGCCCTGGTGCCATTTGGCGGCACTGCTGAAATCGGTTTCAGCGAGGATGT 87905
||||| | ||||| | | | |||||||||||||| ||||||||| ||||||||
Sbjct 294972 CCGTCGTGCTGCCCTTGAAGAAGTGGGCGGCACTGCTGAGATCGGTTTCTCTGAGGATGT 294913
Query 87906 CCACACCGGTTTCTCTGTTGTTGACGCTGGGTGGAAGCTGAAGTATGTGCCTCTGAACCT 87965
||||| || ||| | |||||| || |||||| | | |||||| || | |||||
Sbjct 294912 TCACACTGGATTCGGAGCAGTTGACAGAGGATGGAAGGTCACGTATGTTCCCATCAACCT 294853
Query 87966 GGCCAAGGGTGTCTGTCC 87983
||| ||| |||||||
Sbjct 294852 TGCCTGTGGTATCTGTCC 294835
>seq74
Length=485481
Score = 95.1 bits (104), Expect = 2e-14
Identities = 130/179 (73%), Gaps = 2/179 (1%)
Strand=Plus/Plus
Query 280183 CCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCCACTG 280242
|||| ||||| |||||||||||||| ||||| | || || ||||||| ||| || | |
Sbjct 114750 CCAACGGTGCTGGTAAGTCTACCCTGATCAAGCTTCTCACCGGCGAGA-CCATTCCTCAG 114808
Query 280243 AGGGGTCCGTTTG-GAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGCTTTC 280301
| || | | | |||||| |||||| |||| || | |||| | ||||||||| |
Sbjct 114809 ACCGGAAAGGTCGAGAAGCACCCCAACTTGCGTATCGGTTACATTAAGCAGCACGCTCTT 114868
Query 280302 CACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGCTATGC 280360
| ||| | |||| ||| |||| | ||| || ||||| ||| | |||||||| || ||
Sbjct 114869 GAGCACGTTGAGATGCACTTGGAAAAGACACCCAACCAGTACCTCCAGTGGCGTTACGC 114927
>seq99
Length=346009
Score = 89.7 bits (98), Expect = 1e-12
Identities = 155/223 (70%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
||||||||||| || |||| ||| | || || |||| |||||| |||| |||
Sbjct 48300 GGTGAGGATCTCTGCAACTGCACCTTCAACTTGGCCTACGGTGCCAAGATTTTGCTCAAC 48359
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|| | ||| | | |||||||| | || || ||||| |||||||||| || |
Sbjct 48360 CAGACTCACCTTCGCTTGAAGCGTGGTCAGCGTTACGGTCTTCTCGGTCCCAACGGTTCC 48419
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|| |||| ||| || ||||| ||||| |||| ||| | | ||| ||||| | |||
Sbjct 48420 GGAAAGACCACCCTCATGCGTGCCATCAACAACGAGCAGGTTG-AGGGTTTCCCCAAGCA 48478
Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCC 279566
|||||| | ||| || || || |||||||| ||||||||
Sbjct 48479 GGATGAGGTCAAGACCGTCTACGTCGAGCACGATCTCGACTCC 48521
Score = 87.8 bits (96), Expect = 4e-12
Identities = 112/152 (74%), Gaps = 2/152 (1%)
Strand=Plus/Plus
Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731
|||| | ||||| ||| | ||| || ||||||| || || || ||||| ||||| |
Sbjct 49672 CCAACTTCGGTCTTGACGCTGAGCTTGTTTCTCACTCGCGTATGCGTGGTCTGTCTGGTG 49731
Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790
| ||| ||||| | ||| | | || |||| ||||||| |||||| |||||||
Sbjct 49732 GTCAGCGTGTCAAGGTCGTCCTTGCCGCCTGCTCA-TGGCAACGTCCTCACTTGATCGTC 49790
Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGA 280822
||||||||||| |||||||| || ||||| ||
Sbjct 49791 CTCGACGAGCCCACCAACTACCTCGACCGTGA 49822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027834600750447
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |