Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq161 145 2e-29 seq61 111 3e-19 seq74 95.1 2e-14 seq99 89.7 1e-12 >seq161 Length=251022 Score = 145 bits (160), Expect = 2e-29 Identities = 271/398 (68%), Gaps = 0/398 (0%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| ||| ||||| ||||||||||||||||||||| ||| Sbjct 92860 TCGAAGAAGTTGGTCTTGCCAGCCAACGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTG 92919 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || | ||| |||||| | ||| || || | || | |||||| || |||||||| | Sbjct 92920 GCTTGGTAGATCTTGGGCTCGCCGAGAGCGAGGAGCAGGCGGTCAGCGACAAACTCGATG 92979 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 || || | ||| || | | ||||||||| | | | ||| |||| || || | | | Sbjct 92980 TATTGACACATGAGCTTGGCGTTCATGCCGAGAAGAGCACAGGGAAGAGCATCTGACAAG 93039 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAGC 251802 || || | ||| | || || ||||| | || | || | || ||| || Sbjct 93040 AACTCTTGCTCGATAGCGACAGCCTCGGTGATGATCTCGCGGACGAGAGCAGCAGAGGGC 93099 Query 251803 TTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCGA 251862 ||||||| || | |||| ||||| | | || | ||||| |||||| || ||| Sbjct 93100 TTGTTCTTGAGGTGAGAGTGGAGGAGGCAGGCGAAGTCGGTGTGCATACCCTCATCACGA 93159 Query 251863 CTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAAG 251922 ||||| ||||||||| | || || ||||| | ||||| ||| ||||||||||| Sbjct 93160 GAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAG 93219 Query 251923 ATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGAC 251960 || | ||||| |||||||| | | ||||||||| Sbjct 93220 ATGGAAGCGAAGGAGCCAGAGAAGAAGATACCCTCGAC 93257 >seq61 Length=336882 Score = 111 bits (122), Expect = 3e-19 Identities = 255/378 (67%), Gaps = 12/378 (3%) Strand=Plus/Minus Query 87612 CATCTTCGATGCTGACTTCTGCCCGCGCAAGGACTTCATCACGGAAATTATGCCATACTT 87671 ||||| |||||| ||||||||||| || |||||| || ||| | || || | | Sbjct 295206 CATCTACGATGCCGACTTCTGCCCCCGATCCGACTTCCTCCTGGAGACCATTCCTCA--T 295149 Query 87672 CAACT-----ATGACAAATCCATCGCCATCGTCCAGACCCCCCAGTTCTTTGAGGTGCGT 87726 || || |||||||| | | || || || ||||| || || ||||| || | Sbjct 295148 CACCTTGCTGATGACAAA--CTTTGC-ATTGTTCAGACACCTCAATTCTTCCGAGTCTCT 295092 Query 87727 CCAGACCAGACTTGGGTAGAGCGTGCTGCAGGTTCTGTCCAGGAACTGTTCTACCGCTTC 87786 || || |||||||| || | | |||| || | || |||||| ||||||| || || Sbjct 295091 GACGAACAAACTTGGGTTGAACAGGGTGCAAGTGCCGTTCAGGAATTGTTCTATCGTGTC 295032 Query 87787 ATCCAGGTGTCTCGCGAATCATTTGGC-GCTGCAGTGTGCGTGGGTACTTGTGCTATGTA 87845 | || ||| || |||| | || ||| | | || || |||| |||| | || Sbjct 295031 GTTCAAGTGAACCGA-AATCGCTGGGGAGCTTCGATCTGTGTTGGTAGCAATGCTGTCTA 294973 Query 87846 TCGTCGCGAGGCCCTGGTGCCATTTGGCGGCACTGCTGAAATCGGTTTCAGCGAGGATGT 87905 ||||| | ||||| | | | |||||||||||||| ||||||||| |||||||| Sbjct 294972 CCGTCGTGCTGCCCTTGAAGAAGTGGGCGGCACTGCTGAGATCGGTTTCTCTGAGGATGT 294913 Query 87906 CCACACCGGTTTCTCTGTTGTTGACGCTGGGTGGAAGCTGAAGTATGTGCCTCTGAACCT 87965 ||||| || ||| | |||||| || |||||| | | |||||| || | ||||| Sbjct 294912 TCACACTGGATTCGGAGCAGTTGACAGAGGATGGAAGGTCACGTATGTTCCCATCAACCT 294853 Query 87966 GGCCAAGGGTGTCTGTCC 87983 ||| ||| ||||||| Sbjct 294852 TGCCTGTGGTATCTGTCC 294835 >seq74 Length=485481 Score = 95.1 bits (104), Expect = 2e-14 Identities = 130/179 (73%), Gaps = 2/179 (1%) Strand=Plus/Plus Query 280183 CCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCCACTG 280242 |||| ||||| |||||||||||||| ||||| | || || ||||||| ||| || | | Sbjct 114750 CCAACGGTGCTGGTAAGTCTACCCTGATCAAGCTTCTCACCGGCGAGA-CCATTCCTCAG 114808 Query 280243 AGGGGTCCGTTTG-GAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGCTTTC 280301 | || | | | |||||| |||||| |||| || | |||| | ||||||||| | Sbjct 114809 ACCGGAAAGGTCGAGAAGCACCCCAACTTGCGTATCGGTTACATTAAGCAGCACGCTCTT 114868 Query 280302 CACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGCTATGC 280360 | ||| | |||| ||| |||| | ||| || ||||| ||| | |||||||| || || Sbjct 114869 GAGCACGTTGAGATGCACTTGGAAAAGACACCCAACCAGTACCTCCAGTGGCGTTACGC 114927 >seq99 Length=346009 Score = 89.7 bits (98), Expect = 1e-12 Identities = 155/223 (70%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 ||||||||||| || |||| ||| | || || |||| |||||| |||| ||| Sbjct 48300 GGTGAGGATCTCTGCAACTGCACCTTCAACTTGGCCTACGGTGCCAAGATTTTGCTCAAC 48359 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 || | ||| | | |||||||| | || || ||||| |||||||||| || | Sbjct 48360 CAGACTCACCTTCGCTTGAAGCGTGGTCAGCGTTACGGTCTTCTCGGTCCCAACGGTTCC 48419 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || |||| ||| || ||||| ||||| |||| ||| | | ||| ||||| | ||| Sbjct 48420 GGAAAGACCACCCTCATGCGTGCCATCAACAACGAGCAGGTTG-AGGGTTTCCCCAAGCA 48478 Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCC 279566 |||||| | ||| || || || |||||||| |||||||| Sbjct 48479 GGATGAGGTCAAGACCGTCTACGTCGAGCACGATCTCGACTCC 48521 Score = 87.8 bits (96), Expect = 4e-12 Identities = 112/152 (74%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731 |||| | ||||| ||| | ||| || ||||||| || || || ||||| ||||| | Sbjct 49672 CCAACTTCGGTCTTGACGCTGAGCTTGTTTCTCACTCGCGTATGCGTGGTCTGTCTGGTG 49731 Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790 | ||| ||||| | ||| | | || |||| ||||||| |||||| ||||||| Sbjct 49732 GTCAGCGTGTCAAGGTCGTCCTTGCCGCCTGCTCA-TGGCAACGTCCTCACTTGATCGTC 49790 Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 ||||||||||| |||||||| || ||||| || Sbjct 49791 CTCGACGAGCCCACCAACTACCTCGACCGTGA 49822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027834600750447