Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016-
12-23] 167 sequences; 28,173,731 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq21 188 1e-42
seq26 159 6e-34
seq161 125 1e-23
seq61 114 2e-20
>seq21
Length=270181
Score = 188 bits (208), Expect = 1e-42
Identities = 178/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| | | |||||||| || || ||||| || |||||||| || || |||
Sbjct 160971 CCGCCACGAAGTCTGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAG 161030
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || |||||||| |||||||| || || | || ||||| || ||
Sbjct 161031 AGCGTACGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGG 161090
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| | ||||||| ||||||||||||| |||||| |||
Sbjct 161091 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCTGATGATTCCACT 161150
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| |||||||| ||||| || || ||||||||||| ||||||||
Sbjct 161151 TCCAATGTGATGGTCTTTCCAGTAAGAGTCTTGACGAAGATCTGCAT 161197
Score = 167 bits (184), Expect = 4e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | || | ||| || ||||| || || |||||||| || ||||||
Sbjct 161199 CCACCACGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAG 161258
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || ||||| || || | || ||||| || |||
Sbjct 161259 AGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGGGGA 161318
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | |||||| ||||||||||| | || || ||
Sbjct 161319 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGACC 161378
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||| || || ||||||||||||||||| ||||||||
Sbjct 161379 TCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 161425
Score = 127 bits (140), Expect = 4e-24
Identities = 151/205 (74%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| |||||||| || | || | ||| || ||||| || || |||||||| || |||
Sbjct 161427 CCACCGCGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGCTA 161486
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || || || ||||| | || || || || |||
Sbjct 161487 AGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCCGGAGGA 161546
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||||||||||||||| ||||| ||||||| || |||||||| | ||| || ||
Sbjct 161547 ATGCCTTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCAATGGTGTCGGATGACTCGACC 161606
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439
|| | ||||||||| || || ||||
Sbjct 161607 TCAAGGGTGATGGTCTTGCCGGTGA 161631
>seq26
Length=70271
Score = 159 bits (176), Expect = 6e-34
Identities = 166/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | || | ||| || || ||||| || |||||||| || |||||
Sbjct 12753 CCACCACGGAGACGGAGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAA 12812
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| |||||||| || || | |||||||| || |||
Sbjct 12813 AGAGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCCGGGGGA 12872
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| ||||||| ||||||||||| | || || ||
Sbjct 12873 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCAGAGGACTCGACC 12932
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|| | ||||||||| || ||||| ||||||||||||||
Sbjct 12933 TCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 12970
>seq161
Length=251022
Score = 125 bits (138), Expect = 1e-23
Identities = 293/441 (66%), Gaps = 6/441 (1%)
Strand=Plus/Plus
Query 9933 TTCATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCC 9992
|||||||| || ||||||||||| || || | |||||||||||||| ||||||
Sbjct 92821 TTCATGACACCAGCCTTCTGGTAGTCACCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCA 92880
Query 9993 TCGAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAA 10052
| | || ||| |||||||||||| |||||||| ||| | |||||| |
Sbjct 92881 GCCAACGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCTTGGTAGATCTTGGGCTCG 92940
Query 10053 CCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAG 10112
||||| || || | ||||||||| || ||||||||||| || | ||| || | | |
Sbjct 92941 CCGAGAGCGAGGAGCAGGCGGTCAGCGACAAACTCGATGTATTGACACATGAGCTTGGCG 93000
Query 10113 TTCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACC 10172
|||||||| | | ||||| | || || | | ||| || | ||| | |||||
Sbjct 93001 TTCATGCCGAGAAGAGCACAGGGAAGAGCATCTGACAAGAACTCTTGCTCGATAGCGACA 93060
Query 10173 GCTTCCTCGACGATGCTCT---TTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAA 10229
| ||||| |||| ||| || | || || ||||||||| ||| | ||
Sbjct 93061 G---CCTCGGTGATGATCTCGCGGACGAGAGCAGCAGAGGGCTTGTTCTTGAGGTGAGAG 93117
Query 10230 TACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGAC 10289
| ||||| | || | ||| | ||||| || || ||||| |||||||||
Sbjct 93118 TGGAGGAGGCAGGCGAAGTCGGTGTGCATACCCTCATCACGAGAGATGAGCTCGTTGGAG 93177
Query 10290 AAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCG 10349
|| |||||||||||||| || || || |||||||| |||| ||| || ||
Sbjct 93178 AAGGTAAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCA 93237
Query 10350 GAGAACAGAAGACCCTCCACG 10370
||||| | | |||||| |||
Sbjct 93238 GAGAAGAAGATACCCTCGACG 93258
>seq61
Length=336882
Score = 114 bits (126), Expect = 2e-20
Identities = 338/509 (66%), Gaps = 14/509 (3%)
Strand=Plus/Plus
Query 59098 CATGCCGGACAGGAAGCAGGCCTTTTGGCGGAAGCTCAGATTGGACTTCCAGAAGTGGGG 59157
||| ||| | || |||| |||| ||| || | | || | || ||||||| | |||
Sbjct 294705 CATTCCGCATAGATAGCACACCTTCTGGGTGAGGTTGAGGCTCGAAGTCCAGAATTCGGG 294764
Query 59158 GTTGGTGCACAGAGTCGTGGAACCCAGCGCCCAACGGTATTGCTGGCTGAAGAACGA-CT 59216
||| || || || ||||| |||| ||| || ||||| |||||| | |
Sbjct 294765 GTTCGTCAGAAGGGTAGTGGATCCCATACACCAGCGCATCTGCTGAGAGAAGAATGCTCG 294824
Query 59217 TGAGCTCGTAGGGGCAAACTCCCTTGGCAAGGTTCAGGGGAATGTACTTGAGCTTCCAGC 59276
|| | | || || || | || ||||||||| | ||||| ||| ||| |||||| |
Sbjct 294825 TGGGTT-GTCCGGACAGATACCACAGGCAAGGTTGATGGGAACATACGTGACCTTCCATC 294883
Query 59277 CGTCGTCAACTACTGCAAAGCCCGTGTGGACGTCCTCGCTGAAGCCAATCTCAGCAGTGC 59336
| ||||||| || | || || ||||| || ||||| ||| || |||||||||||||
Sbjct 294884 CTCTGTCAACTGCTCCGAATCCAGTGTGAACATCCTCAGAGAAACCGATCTCAGCAGTGC 294943
Query 59337 CGCCGAAAGGTACAAGCGCCTCTCGGCGGTAGACTGCGCATGTCCCGACGCACA-CGGCG 59395
|||| | | |||| || | || |||||||| || | || || || | || |
Sbjct 294944 CGCCCACTTCTTCAAGGGCAGCACGACGGTAGACAGCATTGCTACCAACACAGATCGAAG 295003
Query 59396 C-CGCCAAAGGTGTCGCGAGAAACCTGGATGAAACGGTAGAACAGTTCCTGGACGGATCC 59454
| | ||| | | | || || || | || ||| ||||||| |||||| |||| |
Sbjct 295004 CTCCCCAGCGATTT--CGGTTCACTTGAACGACACGATAGAACAATTCCTGAACGGCACT 295061
Query 59455 AGCAGCGCGCTCAACCCAAGTCTGGTCGGGGCGAACCTC-GAAGAACTGGGGGGTCTGCA 59513
||| | | ||||||||||| || || | || ||| |||||| || || ||||| |
Sbjct 295062 TGCACCCTGTTCAACCCAAGTTTGTTC-GTCAGAGACTCGGAAGAATTGAGGTGTCTGAA 295120
Query 59514 CAATCGCGATCTTGCCGTCATGGGAAAAG---TAGGGCATGATTTCCTTGAGGTAGTCAG 59570
|||| || | || ||||| | || | | || ||| | ||| |||| |||| |
Sbjct 295121 CAAT-GCAAAGTT--TGTCATCAGCAAGGTGATGAGGAATGGTCTCCAGGAGGAAGTCGG 295177
Query 59571 GGCGCGGACAGAAGTCAGCATCGAAGATG 59599
|| || |||||||| |||||| |||||
Sbjct 295178 ATCGGGGGCAGAAGTCGGCATCGTAGATG 295206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921620476113240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |