Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016-
12-23] 167 sequences; 28,173,731 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq21 129 1e-24
seq24 104 6e-17
seq26 102 2e-16
>seq21
Length=270181
Score = 129 bits (142), Expect = 1e-24
Identities = 143/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||| | |||||| || ||||| || || || ||||| ||||||
Sbjct 161007 TCCTTCTGGATGTTGTAGTCAGAGAGCGTACGACCGTCCTCCAACTGCTTTCCGGCGAAG 161066
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||| ||||| || ||||| || || || |||||||| |||| || |||||
Sbjct 161067 ATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTG 161126
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || ||||| ||||| | ||||| ||||| || || ||||||||||||
Sbjct 161127 TCGATGGTGTCTGATGATTCCACTTCCAATGTGATGGTCTTTCCAGTAAGAGTCTTGACG 161186
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 161187 AAGATCTGCAT 161197
Score = 127 bits (140), Expect = 5e-24
Identities = 167/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || ||||| || | ||| ||| || ||||| || ||||||| |
Sbjct 161199 CCACCACGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAG 161258
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || || || | || || || ||||||||||| ||||| || ||||||
Sbjct 161259 AGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTG---GTCTGGG 161315
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || |||||||| |||| || || || || || | ||| ||| ||
Sbjct 161316 GGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCG 161375
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || ||||| ||||| ||||| || ||||||||||| ||||||||
Sbjct 161376 ACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 161425
>seq24
Length=268411
Score = 104 bits (114), Expect = 6e-17
Identities = 199/287 (69%), Gaps = 6/287 (2%)
Strand=Plus/Minus
Query 325964 ACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAG 326023
|||||||| |||||||| | | || |||||| |||| | || | | | ||||||| |
Sbjct 192729 ACGATAGGTGTGATGAATTCCAGCAGGAACCCAGGAAGCTTAAGCAAACT-GGGAAACTG 192671
Query 326024 --CTATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGG 326081
|| || || ||||| || | ||||| || ||| |||| || |||| ||||
Sbjct 192670 GACT-TGCAAGAAGTTGATCAAAAGACCCTTGATATGACTTCCATCGTGATCCTGATCGG 192612
Query 326082 TCATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTT 326141
|||||||||||| ||| ||||| ||||| || ||| ||||| | || | ||
Sbjct 192611 TCATGATCATCAGATGGCCGTAGCGAAGACCCTTGGTATCTGTGTACTCCTTCTTGTGTT 192552
Query 326142 GAAGGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGCCACG 326200
| || || | || || |||| | ||| |||||| ||||||||| || | ||
Sbjct 192551 GCAGTCCCATAAACTGCTTGATGTTCTG-AATTTCTGCGTTCTTCGAAATCTGATCGACT 192493
Query 326201 GATGCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCC 326247
||||| ||||| |||||||| | || ||||| |||||||| || ||
Sbjct 192492 GATGCGTCGCGAACGTTCAACATCTTACCACGCAGAGGGAAGACACC 192446
>seq26
Length=70271
Score = 102 bits (112), Expect = 2e-16
Identities = 158/222 (71%), Gaps = 8/222 (4%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || || |||| || || || ||||| || |||||||
Sbjct 12753 CCACCACGGAGACGGAGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAA 12812
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || || || | || ||||| ||||||||||| |||||||| || |||
Sbjct 12813 AGAGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTG---GTCCGGG 12869
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTC 288422
|| || || || |||||||| || ||| || ||||| || || | || || ||
Sbjct 12870 GGAATGCCCTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCAGAGGACTC 12928
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| || || ||||| ||||| || || || |||||||||||
Sbjct 12929 GACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 12970
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179651875908226
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |