Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq21 129 1e-24 seq24 104 6e-17 seq26 102 2e-16 >seq21 Length=270181 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | |||||| || ||||| || || || ||||| |||||| Sbjct 161007 TCCTTCTGGATGTTGTAGTCAGAGAGCGTACGACCGTCCTCCAACTGCTTTCCGGCGAAG 161066 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| ||||| || ||||| || || || |||||||| |||| || ||||| Sbjct 161067 ATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTG 161126 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || ||||| ||||| | ||||| ||||| || || |||||||||||| Sbjct 161127 TCGATGGTGTCTGATGATTCCACTTCCAATGTGATGGTCTTTCCAGTAAGAGTCTTGACG 161186 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 161187 AAGATCTGCAT 161197 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || ||||| || | ||| ||| || ||||| || ||||||| | Sbjct 161199 CCACCACGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAG 161258 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || ||||||||||| ||||| || |||||| Sbjct 161259 AGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTG---GTCTGGG 161315 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || |||||||| |||| || || || || || | ||| ||| || Sbjct 161316 GGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCG 161375 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 161376 ACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 161425 >seq24 Length=268411 Score = 104 bits (114), Expect = 6e-17 Identities = 199/287 (69%), Gaps = 6/287 (2%) Strand=Plus/Minus Query 325964 ACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAG 326023 |||||||| |||||||| | | || |||||| |||| | || | | | ||||||| | Sbjct 192729 ACGATAGGTGTGATGAATTCCAGCAGGAACCCAGGAAGCTTAAGCAAACT-GGGAAACTG 192671 Query 326024 --CTATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGG 326081 || || || ||||| || | ||||| || ||| |||| || |||| |||| Sbjct 192670 GACT-TGCAAGAAGTTGATCAAAAGACCCTTGATATGACTTCCATCGTGATCCTGATCGG 192612 Query 326082 TCATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTT 326141 |||||||||||| ||| ||||| ||||| || ||| ||||| | || | || Sbjct 192611 TCATGATCATCAGATGGCCGTAGCGAAGACCCTTGGTATCTGTGTACTCCTTCTTGTGTT 192552 Query 326142 GAAGGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGCCACG 326200 | || || | || || |||| | ||| |||||| ||||||||| || | || Sbjct 192551 GCAGTCCCATAAACTGCTTGATGTTCTG-AATTTCTGCGTTCTTCGAAATCTGATCGACT 192493 Query 326201 GATGCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCC 326247 ||||| ||||| |||||||| | || ||||| |||||||| || || Sbjct 192492 GATGCGTCGCGAACGTTCAACATCTTACCACGCAGAGGGAAGACACC 192446 >seq26 Length=70271 Score = 102 bits (112), Expect = 2e-16 Identities = 158/222 (71%), Gaps = 8/222 (4%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || |||| || || || ||||| || ||||||| Sbjct 12753 CCACCACGGAGACGGAGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAA 12812 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || ||||| ||||||||||| |||||||| || ||| Sbjct 12813 AGAGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTG---GTCCGGG 12869 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTC 288422 || || || || |||||||| || ||| || ||||| || || | || || || Sbjct 12870 GGAATGCCCTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCAGAGGACTC 12928 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || || || ||||| ||||| || || || ||||||||||| Sbjct 12929 GACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 12970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179651875908226