Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq24 100 6e-16 seq74 95.1 3e-14 seq161 89.7 1e-12 >seq24 Length=268411 Score = 100 bits (110), Expect = 6e-16 Identities = 198/287 (69%), Gaps = 6/287 (2%) Strand=Plus/Minus Query 298085 ACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAG 298144 |||||||| |||||||| | | || |||||| |||| | || | | | ||||||| | Sbjct 192729 ACGATAGGTGTGATGAATTCCAGCAGGAACCCAGGAAGCTTAAGCAAACT-GGGAAACTG 192671 Query 298145 --CTATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGG 298202 || || || ||||| || | ||||| || ||| |||| || |||| |||| Sbjct 192670 GACT-TGCAAGAAGTTGATCAAAAGACCCTTGATATGACTTCCATCGTGATCCTGATCGG 192612 Query 298203 TCATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTT 298262 |||||||||||| ||| ||||| ||||| || ||| ||||| | || | || Sbjct 192611 TCATGATCATCAGATGGCCGTAGCGAAGACCCTTGGTATCTGTGTACTCCTTCTTGTGTT 192552 Query 298263 GAAGGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGCCACG 298321 | || || | || || |||| | ||| |||||| ||||||||| || | || Sbjct 192551 GCAGTCCCATAAACTGCTTGATGTTCTG-AATTTCTGCGTTCTTCGAAATCTGATCGACT 192493 Query 298322 GATGCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCC 298368 ||||| ||||| || ||||| | || ||||| |||||||| || || Sbjct 192492 GATGCGTCGCGAACGTTCAACATCTTACCACGCAGAGGGAAGACACC 192446 >seq74 Length=485481 Score = 95.1 bits (104), Expect = 3e-14 Identities = 190/281 (68%), Gaps = 3/281 (1%) Strand=Plus/Minus Query 333713 TTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTT 333772 |||||| || ||| || || ||| || || |||||||| || ||||| || Sbjct 114547 TTCGGGCTTCTGCTTGACAAAGGCGGCAAGGTTACCCTTGTAGTTGACAAGCTTC---TT 114491 Query 333773 AGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACAC 333832 | ||||| ||||| || ||||| ||| |||||||||| || |||||||| || || Sbjct 114490 GGTCTCGTAGTGGATGATGTCAGTGCAGACATCGTCGAGGAAACCAGAGTCGTGAGAGAC 114431 Query 333833 AATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGA 333892 ||||| | | | ||| | | | | ||||| || ||||| || ||||| | Sbjct 114430 AATCAGCGAGGTGATGTCAGTGTGAGTTCTGAGGTACTCCTGGAGCCATCTGACGTTGGC 114371 Query 333893 CACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGC 333952 ||| |||||||||||| || ||||| ||||| | | | ||| || | ||| || Sbjct 114370 AACATCAAGATGGTTGGTAGGTTCGTCGAGAAGGAAGACGTCGGCGCGCATCAACATGGC 114311 Query 333953 ACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCTGAAAGAG 333993 | || | |||||| ||||| ||||| || || || |||| Sbjct 114310 TCTGGCCAAAGCGAGCTTCATCTTCCAACCACCAGACAGAG 114270 >seq161 Length=251022 Score = 89.7 bits (98), Expect = 1e-12 Identities = 172/254 (68%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 |||||||| || || || | | ||| | || ||| | | || ||| |||| || Sbjct 93074 ATCATCACCGAGGCTGTCGCTATCGAGCAAGAGTTCTTGTCAGATGCTCTTCCCTGTGCT 93015 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 ||| | ||||||||| | | |||||| | || |||||||| || || || |||||| | Sbjct 93014 CTTCTCGGCATGAACGCCAAGCTCATGTGTCAATACATCGAGTTTGTCGCTGACCGCCTG 92955 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 || |||| || || | || | ||| | ||| |||||||| | ||| |||||| Sbjct 92954 CTCCTCGCTCTCGGCGAGCCCAAGATCTACCAAGCCACCAACCCCTTCGACTTCATGGAG 92895 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741 ||| ||| | || || || ||||||||||| ||| | || |||| || || Sbjct 92894 AACATCTCGTTGGCTGGCAAGACCAACTTCTTCGAGAAGAGAGTTGGTGACTACCAGAAG 92835 Query 243742 CCTGGTGTGATGAA 243755 ||||||| ||||| Sbjct 92834 GCTGGTGTCATGAA 92821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102877640181450