Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016-
12-23] 167 sequences; 28,173,731 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq24 100 6e-16
seq74 95.1 3e-14
seq161 89.7 1e-12
>seq24
Length=268411
Score = 100 bits (110), Expect = 6e-16
Identities = 198/287 (69%), Gaps = 6/287 (2%)
Strand=Plus/Minus
Query 298085 ACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAG 298144
|||||||| |||||||| | | || |||||| |||| | || | | | ||||||| |
Sbjct 192729 ACGATAGGTGTGATGAATTCCAGCAGGAACCCAGGAAGCTTAAGCAAACT-GGGAAACTG 192671
Query 298145 --CTATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGG 298202
|| || || ||||| || | ||||| || ||| |||| || |||| ||||
Sbjct 192670 GACT-TGCAAGAAGTTGATCAAAAGACCCTTGATATGACTTCCATCGTGATCCTGATCGG 192612
Query 298203 TCATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTT 298262
|||||||||||| ||| ||||| ||||| || ||| ||||| | || | ||
Sbjct 192611 TCATGATCATCAGATGGCCGTAGCGAAGACCCTTGGTATCTGTGTACTCCTTCTTGTGTT 192552
Query 298263 GAAGGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGCCACG 298321
| || || | || || |||| | ||| |||||| ||||||||| || | ||
Sbjct 192551 GCAGTCCCATAAACTGCTTGATGTTCTG-AATTTCTGCGTTCTTCGAAATCTGATCGACT 192493
Query 298322 GATGCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCC 298368
||||| ||||| || ||||| | || ||||| |||||||| || ||
Sbjct 192492 GATGCGTCGCGAACGTTCAACATCTTACCACGCAGAGGGAAGACACC 192446
>seq74
Length=485481
Score = 95.1 bits (104), Expect = 3e-14
Identities = 190/281 (68%), Gaps = 3/281 (1%)
Strand=Plus/Minus
Query 333713 TTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTT 333772
|||||| || ||| || || ||| || || |||||||| || ||||| ||
Sbjct 114547 TTCGGGCTTCTGCTTGACAAAGGCGGCAAGGTTACCCTTGTAGTTGACAAGCTTC---TT 114491
Query 333773 AGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACAC 333832
| ||||| ||||| || ||||| ||| |||||||||| || |||||||| || ||
Sbjct 114490 GGTCTCGTAGTGGATGATGTCAGTGCAGACATCGTCGAGGAAACCAGAGTCGTGAGAGAC 114431
Query 333833 AATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGA 333892
||||| | | | ||| | | | | ||||| || ||||| || ||||| |
Sbjct 114430 AATCAGCGAGGTGATGTCAGTGTGAGTTCTGAGGTACTCCTGGAGCCATCTGACGTTGGC 114371
Query 333893 CACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGC 333952
||| |||||||||||| || ||||| ||||| | | | ||| || | ||| ||
Sbjct 114370 AACATCAAGATGGTTGGTAGGTTCGTCGAGAAGGAAGACGTCGGCGCGCATCAACATGGC 114311
Query 333953 ACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCTGAAAGAG 333993
| || | |||||| ||||| ||||| || || || ||||
Sbjct 114310 TCTGGCCAAAGCGAGCTTCATCTTCCAACCACCAGACAGAG 114270
>seq161
Length=251022
Score = 89.7 bits (98), Expect = 1e-12
Identities = 172/254 (68%), Gaps = 0/254 (0%)
Strand=Plus/Minus
Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561
|||||||| || || || | | ||| | || ||| | | || ||| |||| ||
Sbjct 93074 ATCATCACCGAGGCTGTCGCTATCGAGCAAGAGTTCTTGTCAGATGCTCTTCCCTGTGCT 93015
Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621
||| | ||||||||| | | |||||| | || |||||||| || || || |||||| |
Sbjct 93014 CTTCTCGGCATGAACGCCAAGCTCATGTGTCAATACATCGAGTTTGTCGCTGACCGCCTG 92955
Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681
|| |||| || || | || | ||| | ||| |||||||| | ||| ||||||
Sbjct 92954 CTCCTCGCTCTCGGCGAGCCCAAGATCTACCAAGCCACCAACCCCTTCGACTTCATGGAG 92895
Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741
||| ||| | || || || ||||||||||| ||| | || |||| || ||
Sbjct 92894 AACATCTCGTTGGCTGGCAAGACCAACTTCTTCGAGAAGAGAGTTGGTGACTACCAGAAG 92835
Query 243742 CCTGGTGTGATGAA 243755
||||||| |||||
Sbjct 92834 GCTGGTGTCATGAA 92821
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102877640181450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |