Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq21 93.3 4e-14 >seq21 Length=270181 Score = 93.3 bits (102), Expect = 4e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | || || || || | || ||||| || || |||||||| || Sbjct 161426 ACCACCGCGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGCT 161485 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| |||| || ||||||||||| ||| | ||||| |||||||| || ||||| Sbjct 161486 AAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCCGGAGG 161545 Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359 ||| ||||| || ||||| || || Sbjct 161546 AATGCCTTCCTTGTCTTGGATCTT 161569 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| || || |||||||| || | || || || | || |||||||||||||| Sbjct 161229 GTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCATCCTCAAGCTGCTTGCCA 161288 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || || ||||||||||| || ||||| || || || || || || || ||| Sbjct 161289 GCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTG 161348 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || || | || || || | ||| | |||||||||||| | || Sbjct 161349 ACATTGTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTC 161408 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 161409 TTGACGAAGATCTGCAT 161425 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | ||| ||||| | || | || || || || || |||||||| || | Sbjct 160970 ACCGCCACGAAGTCTGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGA 161029 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || || || |||| || | |||||| ||||| | || || ||||||||||| || || Sbjct 161030 GAGCGTACGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 161089 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| || || | || || | ||||| Sbjct 161090 GATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCTGATGATTCCAC 161149 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | |||||| || || | ||| || ||||| || ||||| Sbjct 161150 TTCCAATGTGATGGTCTTTCCAGTAAGAGTCTTGACGAAGATCTGCAT 161197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499643756991480