Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016-
12-23] 167 sequences; 28,173,731 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq161 114 1e-20
seq21 89.7 5e-13
>seq161
Length=251022
Score = 114 bits (126), Expect = 1e-20
Identities = 330/502 (66%), Gaps = 17/502 (3%)
Strand=Plus/Minus
Query 52343 AAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCCACGC----TGGCCGAGC 52398
|||||| | ||||| | ||||||||| |||||| | | || |||| | |
Sbjct 93333 AAAGGCCGACTGGGCCCTCAAGTGGATCT---GCGACAAGGACTCGACATTTGGCTGC-C 93278
Query 52399 GCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCT 52458
|| || | || |||||| |||||||| | || || || ||| ||| || ||||||
Sbjct 93277 GCTTGATTGCTTTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGCTCCTTCGCTTCCATCT 93218
Query 52459 TTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGC 52518
| | | || | | || | |||||||| || || ||| ||||||| | || || |
Sbjct 93217 TCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTTACCTTCTCCAACGAGCTCATCTCTC 93158
Query 52519 GCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACCGAAA 52578
| || || || ||||||| ||||| || |||||| | || | | | | | |||
Sbjct 93157 GTGATGAGGGTATGCACACCGACTTCGCCTGCCTCCTCCACT---CTCACCTCAA-GAAC 93102
Query 52579 AATTGGATTCGGACACGATCCTGAGC---ATGTTCAAGGAGGCGGTGGCTATCGAAAAGG 52635
|| | || | | || | || || ||| ||||| || |||||||| | |
Sbjct 93101 AA--GCCCTCTGCTGCTCTCGTCCGCGAGATCATCACCGAGGCTGTCGCTATCGAGCAAG 93044
Query 52636 AGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCG 52695
|||| || | | || || || | || || ||||||||||| || ||||||
Sbjct 93043 AGTTCTTGTCAGATGCTCTTCCCTGTGCTCTTCTCGGCATGAACGCCAAGCTCATGTGTC 92984
Query 52696 AGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCA 52755
| |||||||||||||| || || || ||| | | ||||| |||| ||| || |
Sbjct 92983 AATACATCGAGTTTGTCGCTGACCGCCTGCTCCTCGCTCTCGGCGAGCCCAAGATCTACC 92924
Query 52756 ACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTT 52815
| || ||| || || || || ||| | ||||| ||| | | |||||||||||||| |
Sbjct 92923 AAGCCACCAACCCCTTCGACTTCATGGAGAACATCTCGTTGGCTGGCAAGACCAACTTCT 92864
Query 52816 TCGAGAAGCGAGTCGGCGAGTA 52837
|||||||| |||| || || ||
Sbjct 92863 TCGAGAAGAGAGTTGGTGACTA 92842
>seq21
Length=270181
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465
|| || || | | |||||||||| || ||||||||||| | ||||| ||||||
Sbjct 160989 ACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTACGACCGTCCTCC 161048
Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525
| || || |||| |||| || ||||| |||||||| || ||||| || ||||| |
Sbjct 161049 AACTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 161108
Query 138526 ATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTA 138585
|| || || | | || | |||||| | || ||||| || | || | || ||
Sbjct 161109 ATCTTCGACTTGACGTTGTCGATGGTGTCTGATGATTCCACTTCCAATGTGATGGTCTTT 161168
Query 138586 CCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||| ||||| || || || ||||||||
Sbjct 161169 CCAGTAAGAGTCTTGACGAAGATCTGCAT 161197
Score = 84.2 bits (92), Expect = 2e-11
Identities = 137/195 (70%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| ||||| || |||||||||||| | |||||| ||||| || || || || |
Sbjct 161232 GATTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCG 161291
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539
|||| || ||||| ||||| || || || || || ||||| ||| || || | |
Sbjct 161292 AAGATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACA 161351
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
||| || | |||||||| |||||| ||||| | || | || || || || || || ||
Sbjct 161352 TTG-TCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTT 161410
Query 138600 TACAAAAATCTGCAT 138614
|| || ||||||||
Sbjct 161411 GACGAAGATCTGCAT 161425
Score = 84.2 bits (92), Expect = 2e-11
Identities = 108/149 (72%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| ||||| || |||||||||||||| | || || ||||||||| || || || | |
Sbjct 161460 GATTCCTTCTGGATGTTGTAGTCGCTAAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCA 161519
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| || ||||| || |||||||| || ||||| ||||| ||| || || |
Sbjct 161520 AAGATGAGGCGCTGCTGATCCGGAGGAATGCCTTCCTTGTCTTGGATCTTGCTCTTGACG 161579
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTC 138569
| || | |||||||| ||||| |||||
Sbjct 161580 TTGTCAATGGTGTCGGATGACTCGACCTC 161608
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496261364052240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |